RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 KCNK16Q96T55 309 aa12.24□□□□□ -0.45
PFDN1-201ENST00000261813 SMOQ99835 787 aa12.24□□□□□ -0.45
PFDN1-201ENST00000261813 BAG1Q99933 345 aaPredicted RBP12.24□□□□□ -0.45
PFDN1-201ENST00000261813 ZSWIM1Q9BR11 485 aa12.24□□□□□ -0.45
PFDN1-201ENST00000261813 CORO1BQ9BR76 489 aa12.24□□□□□ -0.45
PFDN1-201ENST00000261813 ZNF334Q9HCZ1 680 aaPredicted RBP12.24□□□□□ -0.45
PFDN1-201ENST00000261813 KRT82Q9NSB4 513 aa12.24□□□□□ -0.45
PFDN1-201ENST00000261813 AIPL1Q9NZN9 384 aa12.24□□□□□ -0.45
PFDN1-201ENST00000261813 ASB3Q9Y575 518 aa12.24□□□□□ -0.45
PFDN1-201ENST00000261813 DENND4AQ7Z401 1863 aa12.24□□□□□ -0.45
PFDN1-201ENST00000261813 ATP8B3O60423 1300 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 MOSPD3O75425 235 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 AP1G2O75843 785 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 KRT5P13647 590 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 CD19P15391 556 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 HMGA1P17096 107 aaKnown RBP12.23□□□□□ -0.45
PFDN1-201ENST00000261813 ANXA13P27216 316 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 CCR2P41597 374 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 EPHA5P54756 1037 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 RAPGEF1Q13905 1077 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 DRAP1Q14919 205 aaPredicted RBP12.23□□□□□ -0.45
PFDN1-201ENST00000261813 VEPH1Q14D04 833 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 SLC5A9Q2M3M2 681 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 PABPC1LQ4VXU2 614 aaKnown RBP12.23□□□□□ -0.45
PFDN1-201ENST00000261813 PRSS36Q5K4E3 855 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 CLEC20AQ6ZU45 233 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 PHF7Q9BWX1 381 aaPredicted RBP12.23□□□□□ -0.45
PFDN1-201ENST00000261813 CSNK1G1Q9HCP0 422 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 DMAP1Q9NPF5 467 aaPredicted RBP12.23□□□□□ -0.45
PFDN1-201ENST00000261813 ACP6Q9NPH0 428 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 NLRC4Q9NPP4 1024 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 AVENQ9NQS1 362 aaPredicted RBP12.23□□□□□ -0.45
PFDN1-201ENST00000261813 FAM50BQ9Y247 325 aa12.23□□□□□ -0.45
PFDN1-201ENST00000261813 LRRC53A6NM62 1247 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 SLC38A8A6NNN8 435 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 O00370 1275 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 FOXN3O00409 490 aaPredicted RBP12.22□□□□□ -0.45
PFDN1-201ENST00000261813 ARHGAP6O43182 974 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 FAM200BP0CF97 657 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 ALADP13716 330 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 FSHRP23945 695 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 BRD2P25440 801 aaKnown RBP12.22□□□□□ -0.45
PFDN1-201ENST00000261813 SOX5P35711 763 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 GGCXP38435 758 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 MAP3K7CLP57077 242 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 BPIFB4P59827 614 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 MEA1Q16626 185 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 GOLGA7BQ2TAP0 167 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 SGO2Q562F6 1265 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 BRICD5Q6PL45 260 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 GET4Q7L5D6 327 aaPredicted RBP12.22□□□□□ -0.45
PFDN1-201ENST00000261813 ITIH5Q86UX2 942 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 VPS36Q86VN1 386 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 TTC30AQ86WT1 665 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 CCDC170Q8IYT3 715 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 GJD3Q8N144 294 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 ITFG1Q8TB96 612 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 BAP1Q92560 729 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 TCEAL4Q96EI5 215 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 SPATA17Q96L03 361 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 SPSB2Q99619 263 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 ASAH2Q9NR71 780 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 TSPAN16Q9UKR8 245 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 KIAA1257Q9ULG3 409 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 NOTCH4Q99466 2003 aa12.22□□□□□ -0.45
PFDN1-201ENST00000261813 PRR33A8MZF0 331 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 HHLA1C9JL84 531 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 F8VZ95 297 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 TNFRSF10BO14763 440 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 CYP26A1O43174 497 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 CCP110O43303 1012 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 IPO7O95373 1038 aaKnown RBP12.21□□□□□ -0.45
PFDN1-201ENST00000261813 SERPING1P05155 500 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 CSH1P0DML2 217 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 CSH2P0DML3 217 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 SKILP12757 684 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 MYL4P12829 197 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 GJA1P17302 382 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 NPR3P17342 541 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 SP100P23497 879 aaPredicted RBP12.21□□□□□ -0.45
PFDN1-201ENST00000261813 GNA15P30679 374 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 USP8P40818 1118 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 JAM2P57087 298 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 ZP2Q05996 745 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 ASIC2Q16515 512 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 DENND5BQ6ZUT9 1274 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 GAREM2Q75VX8 874 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 PDZD4Q76G19 769 aaPredicted RBP12.21□□□□□ -0.45
PFDN1-201ENST00000261813 FAM71AQ8IYT1 594 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 ANKRD52Q8NB46 1076 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 SHKBP1Q8TBC3 707 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 CEP295NLQ96MC4 621 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 MYADMQ96S97 322 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 DUSP16Q9BY84 665 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 C11orf16Q9NQ32 467 aa12.21□□□□□ -0.45
PFDN1-201ENST00000261813 MAGED2Q9UNF1 606 aaPredicted RBP12.21□□□□□ -0.45
PFDN1-201ENST00000261813 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.21□□□□□ -0.45
PFDN1-201ENST00000261813 C5orf42Q9H799 3197 aa12.21□□□□□ -0.46
PFDN1-201ENST00000261813 SSU72P8A0A1W2PR75 194 aa12.2□□□□□ -0.46
PFDN1-201ENST00000261813 A0A1W2PRU2 124 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms