RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 RPL5P46777 297 aaKnown RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 YWHAHQ04917 246 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 C16orf46Q6P387 395 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 FAM71AQ8IYT1 594 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 SIX6OS1Q8N1H7 587 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 COPS7BQ9H9Q2 264 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 SH3BP5O60239 455 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 MAN1A2O60476 641 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 WDR4P57081 412 aaKnown RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 ORC1Q13415 861 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 INPP5AQ14642 412 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 N4BP2L1Q5TBK1 243 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 UBA3Q8TBC4 463 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 PSPC1Q8WXF1 523 aaKnown RBP16.8■□□□□ 0.28
SREBF1-201ENST00000261646 TMEM79Q9BSE2 394 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 NIF3L1Q9GZT8 377 aa16.8■□□□□ 0.28
SREBF1-201ENST00000261646 CYP24A1Q07973 514 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 LPCAT4Q643R3 524 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 TMC2Q8TDI7 906 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 ZNF606Q8WXB4 792 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 TMEM165Q9HC07 324 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 SLC39A10Q9ULF5 831 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 USP20Q9Y2K6 914 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 RPS6KL1Q9Y6S9 549 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 SLC1A6P48664 564 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 SOX10P56693 466 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 ATP1A4Q13733 1029 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 TNFAIP1Q13829 316 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 VPS72Q15906 364 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 ACSBG2Q5FVE4 666 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 CLVS1Q8IUQ0 354 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-201ENST00000261646 KATNAL2Q8IYT4 538 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 NSUN6Q8TEA1 469 aaKnown RBP16.79■□□□□ 0.28
SREBF1-201ENST00000261646 ZFRQ96KR1 1074 aaKnown RBP16.79■□□□□ 0.28
SREBF1-201ENST00000261646 CDRT15Q96T59 188 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 SYT15Q9BQS2 421 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 ZNF302Q9NR11 478 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 NID2Q14112 1375 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 SLC4A1P02730 911 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 C6orf222P0C671 652 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-201ENST00000261646 PSMD7P51665 324 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 NLRP11P59045 1033 aaKnown RBP16.79■□□□□ 0.28
SREBF1-201ENST00000261646 USP4Q13107 963 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 PLEKHA7Q6IQ23 1121 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 ZBTB49Q6ZSB9 765 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 TSHZ1Q6ZSZ6 1077 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 FAM228AQ86W67 206 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 ZNF513Q8N8E2 541 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-201ENST00000261646 MTFR1LQ9H019 292 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 NRDE2Q9H7Z3 1164 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 GPATCH2LQ9NWQ4 482 aa16.79■□□□□ 0.28
SREBF1-201ENST00000261646 ESRRBO95718 433 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 POLBP06746 335 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 CPA3P15088 417 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 GLRA2P23416 452 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 GRK2P25098 689 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 AP3M2P53677 418 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 PDAP1Q13442 181 aaKnown RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 POLNQ7Z5Q5 900 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 KYQ8NBH2 561 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 RBM15BQ8NDT2 890 aaKnown RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 MECRQ9BV79 373 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 LIASO43766 372 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 ZC3H11AO75152 810 aaKnown RBP eCLIP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 SPATA31C1P0DKV0 1188 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 RARRES1P49788 294 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 HIRAP54198 1017 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 UBAP2LQ14157 1087 aaKnown RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 FASTKD3Q14CZ7 662 aaKnown RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 DDIASQ8IXT1 998 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 EXOC8Q8IYI6 725 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 RNF149Q8NC42 400 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 SHC3Q92529 594 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 STXBP5LQ9Y2K9 1186 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 V9GYQ6 96 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 MRC1P22897 1456 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 PRR5-ARHGAP8B1AHC4 643 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 PKNOX1P55347 436 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 ARHGAP8P85298 464 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 RWDD4Q6NW29 188 aaKnown RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 BEGAINQ9BUH8 593 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 PHACTR1Q9C0D0 580 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 AS3MTQ9HBK9 375 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 AJAP1Q9UKB5 411 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 ANGPT2O15123 496 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 TBX10O75333 385 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 NUP107P57740 925 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 TAS2R40P59535 323 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 PTK2BQ14289 1009 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 NRF1Q16656 503 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 EMC10Q5UCC4 262 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 CPNE8Q86YQ8 564 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 DDX28Q9NUL7 540 aaKnown RBP16.78■□□□□ 0.28
SREBF1-201ENST00000261646 TAS2R1Q9NYW7 299 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 DCDC2Q9UHG0 476 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 AP4S1Q9Y587 144 aa16.78■□□□□ 0.28
SREBF1-201ENST00000261646 ALDH1A3P47895 512 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms