RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 HYIQ5T013 277 aa10.5□□□□□ -0.73
PALB2-201ENST00000261584 N4BP2L1Q5TBK1 243 aaPredicted RBP10.5□□□□□ -0.73
PALB2-201ENST00000261584 CMC1Q7Z7K0 106 aa10.5□□□□□ -0.73
PALB2-201ENST00000261584 MYLK4Q86YV6 388 aaPredicted RBP10.5□□□□□ -0.73
PALB2-201ENST00000261584 C12orf29Q8N999 325 aa10.5□□□□□ -0.73
PALB2-201ENST00000261584 GDPD5Q8WTR4 605 aa10.5□□□□□ -0.73
PALB2-201ENST00000261584 EME1Q96AY2 570 aa10.5□□□□□ -0.73
PALB2-201ENST00000261584 EBF2Q9HAK2 575 aa10.5□□□□□ -0.73
PALB2-201ENST00000261584 SLC39A10Q9ULF5 831 aa10.5□□□□□ -0.73
PALB2-201ENST00000261584 CORO1CQ9ULV4 474 aaPredicted RBP10.5□□□□□ -0.73
PALB2-201ENST00000261584 STARD13Q9Y3M8 1113 aa10.5□□□□□ -0.73
PALB2-201ENST00000261584 SORBS2O94875 1100 aaKnown RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 ASMTLO95671 621 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 HMGCRP04035 888 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 ARL4AP40617 200 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 SCNN1BP51168 640 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 PLK1P53350 603 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 CDK16Q00536 496 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 PPM1JQ5JR12 505 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 SCARA3Q6AZY7 606 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 SYDE1Q6ZW31 735 aaPredicted RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 ANKS1BQ7Z6G8 1248 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 HPS6Q86YV9 775 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 EIF1ADQ8N9N8 165 aaKnown RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 NSUN6Q8TEA1 469 aaKnown RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 RXFP2Q8WXD0 754 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 ZNF669Q96BR6 464 aaPredicted RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 COPS7BQ9H9Q2 264 aaPredicted RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 PNPOQ9NVS9 261 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 GRID1Q9ULK0 1009 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 USP18Q9UMW8 372 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 DISP2A7MBM2 1401 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 SPATA31A5Q5VU36 1347 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 SPATA31A7Q8IWB4 1347 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 WDR27A2RRH5 827 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 CAPN8A6NHC0 703 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 EXTL3O43909 919 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 PRKCBP05771 671 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 PGK2P07205 417 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 ERVK-10P10266 1014 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 TSPAN8P19075 237 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 COPAP53621 1224 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 MORF4L2Q15014 288 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 CCDC14Q49A88 953 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 NUP93Q8N1F7 819 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 TMC2Q8TDI7 906 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 UTP4Q969X6 686 aaKnown RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 CPB2Q96IY4 423 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 PDCD2LQ9BRP1 358 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 ATXN3LQ9H3M9 355 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 ZNF358Q9NW07 568 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 ASNSD1Q9NWL6 643 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 RIPK3Q9Y572 518 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 ASTN2O75129 1339 aaPredicted RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 GRIA1P42261 906 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 TRMT10BQ6PF06 316 aaKnown RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 APOBEC3GQ9HC16 384 aaKnown RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 KLK14Q9P0G3 267 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 GAKO14976 1311 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 RNF103-CHMP3A0A140T963 221 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 APOL1O14791 398 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 PSTPIP1O43586 416 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 TSPAN3O60637 253 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 TMEM63AO94886 807 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 VIL1P09327 827 aaKnown RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 SRGAP2BP0DMP2 458 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 STAT5BP51692 787 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 NOMO3P69849 1222 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 TFDP2Q14188 446 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 CGB2Q6NT52 195 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 SIAH1Q8IUQ4 282 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 CATSPER2Q96P56 530 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 LRMDAQ9H2I8 198 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 TASP1Q9H6P5 420 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 XAB2Q9HCS7 855 aaKnown RBP10.49□□□□□ -0.73
PALB2-201ENST00000261584 PFDN4Q9NQP4 134 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 RPS6KL1Q9Y6S9 549 aa10.49□□□□□ -0.73
PALB2-201ENST00000261584 CYP3A7P24462 503 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 TBXAS1P24557 533 aaPredicted RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 STRIP1Q5VSL9 837 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 MFSD5Q6N075 450 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 LRRC8EQ6NSJ5 796 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 TTC13Q8NBP0 860 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 NDRG1Q92597 394 aaKnown RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 ZDHHC15Q96MV8 337 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 TUBGCP5Q96RT8 1024 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 TUBB6Q9BUF5 446 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 WDR55Q9H6Y2 383 aaPredicted RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 DTNAQ9Y4J8 743 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 C9JVG2 144 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 MOCS2O96007 188 aaPredicted RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 ANPEPP15144 967 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 BAG6P46379 1132 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 RABGGTBP53611 331 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 MRPS9P82933 396 aaKnown RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 TBL3Q12788 808 aaKnown RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 DPYSL3Q14195 570 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 FLOT2Q14254 428 aa10.48□□□□□ -0.73
PALB2-201ENST00000261584 PIGHQ14442 188 aaPredicted RBP10.48□□□□□ -0.73
PALB2-201ENST00000261584 PLEKHG4Q58EX7 1191 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms