RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 C6orf52Q5T4I8 152 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 CES4AQ5XG92 561 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 DPP8Q6V1X1 898 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-201ENST00000261443 DNAJC14Q6Y2X3 702 aaPredicted RBP7.52□□□□□ -1.21
CSDE1-201ENST00000261443 SH2D5Q6ZV89 423 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 LPCAT2Q7L5N7 544 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 RCOR2Q8IZ40 523 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 FBXW8Q8N3Y1 598 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 CCDC33Q8N5R6 958 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 LINC00116Q8NCU8 138 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 CERKQ8TCT0 537 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 ELMO3Q96BJ8 720 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 BIRC8Q96P09 236 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 CBWD1Q9BRT8 395 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 OSBPL6Q9BZF3 934 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 SELENONQ9NZV5 590 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 PSMD13Q9UNM6 376 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 HEY1Q9Y5J3 304 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 KAT6AQ92794 2004 aa7.52□□□□□ -1.21
CSDE1-201ENST00000261443 LOC102724428A0A0B4J2F2 783 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 MATN2O00339 956 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 FBP2O00757 339 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 KRT1P04264 644 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 CIITAP33076 1130 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 ZNF76P36508 570 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 CDK9P50750 372 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 SIK1P57059 783 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 RPS8P62241 208 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 AP3B2Q13367 1082 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 SPIDRQ14159 915 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 CYTH1Q15438 398 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 QRICH1Q2TAL8 776 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 GPATCH4Q5T3I0 446 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 ZSWIM2Q8NEG5 633 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 COX4I2Q96KJ9 171 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 CSRNP1Q96S65 589 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 HNRNPABQ99729 332 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 CCT7Q99832 543 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 WDR83Q9BRX9 315 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 HAUS8Q9BT25 410 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 APOL6Q9BWW8 343 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 SLC13A1Q9BZW2 595 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 ZNHIT2Q9UHR6 403 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 GNEQ9Y223 722 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 PLLPQ9Y342 182 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 FARP1Q9Y4F1 1045 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 SNCAIPQ9Y6H5 919 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 CYB561D2O14569 222 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 MEIS2O14770 477 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 TFPTP0C1Z6 253 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 THRAP10827 490 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 AKR1B1P15121 316 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 NUP107P57740 925 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 WASHC5Q12768 1159 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 OASLQ15646 514 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 LIN9Q5TKA1 542 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 MFSD7Q6UXD7 560 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 SLC30A10Q6XR72 485 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 WDR75Q8IWA0 830 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 PDIK1LQ8N165 341 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 XXYLT1Q8NBI6 393 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 CYP2W1Q8TAV3 490 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 HELQQ8TDG4 1101 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 PPP4R1Q8TF05 950 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 SLC44A1Q8WWI5 657 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 CPT1BQ92523 772 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 MKL1Q969V6 931 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 NLRP4Q96MN2 994 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 NT5C1BQ96P26 610 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 SLITRK1Q96PX8 696 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 P2RX7Q99572 595 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 RTFDC1Q9BY42 306 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 C20orf27Q9GZN8 174 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 TUFT1Q9NNX1 390 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 HERC5Q9UII4 1024 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 ITGA11Q9UKX5 1188 aa7.51□□□□□ -1.21
CSDE1-201ENST00000261443 APOBEC2Q9Y235 224 aaKnown RBP7.51□□□□□ -1.21
CSDE1-201ENST00000261443 BTAF1O14981 1849 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 LOC100653049A0A140TA62 436 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 GOLGA8IPA6NC78 632 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 GOLGA8JA6NMD2 632 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 TRIM49D1C9J1S8 452 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 KRT34O76011 436 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 ALDH2P05091 517 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 ITGAVP06756 1048 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 STX3Q13277 289 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 PDK1Q15118 436 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 USP41Q3LFD5 358 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 TEX44Q53QW1 395 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 DHRS4L2Q6PKH6 230 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 GALNT4Q8N4A0 578 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 KCTD17Q8N5Z5 321 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 CATSPER1Q8NEC5 780 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 TSPAN14Q8NG11 270 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 DEPTORQ8TB45 409 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 CRYGNQ8WXF5 182 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 TMIGD2Q96BF3 282 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 HSD17B14Q9BPX1 270 aa7.5□□□□□ -1.21
CSDE1-201ENST00000261443 TRIM56Q9BRZ2 755 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms