RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ZNF304Q9HCX3 659 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 ARHGEF38Q9NXL2 777 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 CLIC5Q9NZA1 410 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 DNAI1Q9UI46 699 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 MAD2L2Q9UI95 211 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 TRMT6Q9UJA5 497 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 PPIEQ9UNP9 301 aaKnown RBP4.19□□□□□ -1.74
RNF38-201ENST00000259605 COG5Q9UP83 839 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 PADI2Q9Y2J8 665 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 HEY1Q9Y5J3 304 aa4.19□□□□□ -1.74
RNF38-201ENST00000259605 PDS5AQ29RF7 1337 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 KCNK3O14649 394 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 OGTO15294 1046 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 KLHL18O94889 574 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PLGP00747 810 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 IL1BP01584 269 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CCR3P51677 355 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RPS6P62753 249 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 FOXK1P85037 733 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 POU5F1BQ06416 359 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ZNF543Q08ER8 600 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PKDCCQ504Y2 493 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CNKSR3Q6P9H4 555 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PLEKHM3Q6ZWE6 761 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 LPCAT2Q7L5N7 544 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 GALNT7Q86SF2 657 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ZSCAN30Q86W11 494 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RIOX2Q8IUF8 465 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PIGOQ8TEQ8 1089 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 DNAJB3Q8WWF6 145 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PPWD1Q96BP3 646 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 TUBB6Q9BUF5 446 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 FRMD8Q9BZ67 464 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 PHACTR1Q9C0D0 580 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ADNPQ9H2P0 1102 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PARVAQ9NVD7 372 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 MTMR4Q9NYA4 1195 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 WWOXQ9NZC7 414 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 KLHL14Q9P2G3 628 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNF38-201ENST00000259605 TRIM33Q9UPN9 1127 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 GPSM3Q9Y4H4 160 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RAD54BQ9Y620 910 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 EVPLLA8MZ36 301 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 FPGTO14772 594 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 FSHRP23945 695 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 SOAT1P35610 550 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PEX5P50542 639 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 NDST1P52848 882 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 BCAT1P54687 386 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 SNTA1Q13424 505 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PAGE2BQ5JRK9 111 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 TJAP1Q5JTD0 557 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 OLFML2BQ68BL8 750 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 KRT80Q6KB66 452 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 USP17L6PQ6QN14 398 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PEX5LQ8IYB4 626 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 TMEM143Q96AN5 459 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 OTULINQ96BN8 352 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 FUBP3Q96I24 572 aaKnown RBP eCLIP4.18□□□□□ -1.74
RNF38-201ENST00000259605 CLCC1Q96S66 551 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RTP3Q9BQQ7 232 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 FAM167BQ9BTA0 163 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ISCA1Q9BUE6 129 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 TTLL2Q9BWV7 592 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 BBS2Q9BXC9 721 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 NDST4Q9H3R1 872 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 BCAS3Q9H6U6 928 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CYP39A1Q9NYL5 469 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CD274Q9NZQ7 290 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 IFNKQ9P0W0 207 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 C19orf25Q9UFG5 118 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 ENTPD4Q9Y227 616 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ANKRD6Q9Y2G4 727 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 FIS1Q9Y3D6 152 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CAMSAP1Q5T5Y3 1602 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 CLUHO75153 1309 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ARHGEF5Q12774 1597 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PER2O15055 1255 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 KCNQ3O43525 872 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 GRAP2O75791 330 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 MICAL2O94851 1124 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 FSBPO95073 299 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 PRNPP04156 253 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 HIST1H2ABP04908 130 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 VCAM1P19320 739 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 RPL9P32969 192 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 HSPA9P38646 679 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 IL9RQ01113 521 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 ROR1Q01973 937 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 DNM1Q05193 864 aaKnown RBP4.18□□□□□ -1.74
RNF38-201ENST00000259605 VGLL4Q14135 290 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 KLHL40Q2TBA0 621 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 EDRF1Q3B7T1 1238 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 MPZL3Q6UWV2 235 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 TMTC3Q6ZXV5 915 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 HIST3H2AQ7L7L0 130 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 TAF8Q7Z7C8 310 aa4.18□□□□□ -1.74
RNF38-201ENST00000259605 AHI1Q8N157 1196 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms