RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 VCXQ9H320 206 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 SLCO1B3Q9NPD5 702 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 WDR35Q9P2L0 1181 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 MCM8Q9UJA3 840 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CHD5Q8TDI0 1954 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 A6NJR5 290 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 SPTLC1O15269 473 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 SPARCL1Q14515 664 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 R3HDM1Q15032 1099 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 SMTNL2Q2TAL5 461 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 KLHL38Q2WGJ6 581 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ZNF667Q5HYK9 610 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 TLDC1Q6P9B6 456 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 PRPF39Q86UA1 669 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 TRABD2AQ86V40 505 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 TTC30AQ86WT1 665 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 SPNS2Q8IVW8 549 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CTAGE3PQ8IX95 158 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 PARP9Q8IXQ6 854 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CLEC4CQ8WTT0 213 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 DCAKDQ8WVC6 231 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 MAF1Q9H063 256 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 IQANK1A0A1B0GTG1 560 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 H7C0C1 242 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 INO80B-WBP1J3KQ70 363 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 DCTN3O75935 186 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 RFC5P40937 340 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ATP5OP48047 213 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 IREB2P48200 963 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 STAT5BP51692 787 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 AFF1P51825 1210 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 KCNJ2P63252 427 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 SPOCD1Q6ZMY3 1216 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 PLPPR4Q7Z2D5 763 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ZBTB33Q86T24 672 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 RFX6Q8HWS3 928 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 PLD5Q8N7P1 536 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CHST13Q8NET6 341 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 CKAP2Q8WWK9 683 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 MRPL4Q9BYD3 311 aaKnown RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 INO80BQ9C086 356 aaPredicted RBP9.6□□□□□ -0.87
RPA1-201ENST00000254719 VCX3BQ9H321 246 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 ADAMTS10Q9H324 1103 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 PARVAQ9NVD7 372 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 SHROOM3Q8TF72 1996 aa9.6□□□□□ -0.87
RPA1-201ENST00000254719 SCN10AQ9Y5Y9 1956 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 GOLGA8QA0A0J9YX86 632 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 GOLGA8OA6NCC3 632 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 LACTBL1A8MY62 500 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 GOLGA8NF8WBI6 632 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 MAP3K13O43283 966 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 GPR32O75388 356 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 INCA1Q0VD86 236 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 FAM187BQ17R55 369 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 JADE1Q6IE81 842 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 BHLHA9Q7RTU4 235 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 RIBC1Q8N443 379 aaPredicted RBP9.59□□□□□ -0.87
RPA1-201ENST00000254719 KBTBD7Q8WVZ9 684 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 SLC7A6OSQ96CW6 309 aaPredicted RBP9.59□□□□□ -0.87
RPA1-201ENST00000254719 FAM96AQ9H5X1 160 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 MID2Q9UJV3 735 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 DOCK4Q8N1I0 1966 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 A0A0C4DFX4 3053 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 NUP205Q92621 2012 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 TMEM120BA0PK00 339 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 ARHGEF37A1IGU5 675 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 LRRD1A4D1F6 860 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 GAS2O43903 313 aaKnown RBP9.59□□□□□ -0.87
RPA1-201ENST00000254719 PCK1P35558 622 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 TFAMQ00059 246 aaKnown RBP9.59□□□□□ -0.87
RPA1-201ENST00000254719 GADL1Q6ZQY3 521 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 ARHGEF2Q92974 986 aaKnown RBP9.59□□□□□ -0.87
RPA1-201ENST00000254719 KLHL29Q96CT2 875 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 CPB2Q96IY4 423 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 DIAPH2O60879 1101 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 AVILO75366 819 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 ARF4P18085 180 aaPredicted RBP9.59□□□□□ -0.87
RPA1-201ENST00000254719 NCALDP61601 193 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 LDLRAD1Q5T700 205 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 KAZNQ674X7 775 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 CAND1Q86VP6 1230 aaKnown RBP9.59□□□□□ -0.87
RPA1-201ENST00000254719 TP53INP2Q8IXH6 220 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 TRAIPQ9BWF2 469 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 LHX5Q9H2C1 402 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 ASNSD1Q9NWL6 643 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 FLRT1Q9NZU1 646 aa9.59□□□□□ -0.87
RPA1-201ENST00000254719 SPDYE5A6NIY4 337 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 DNALI1O14645 258 aaPredicted RBP9.58□□□□□ -0.88
RPA1-201ENST00000254719 MT-ND3P03897 115 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 CYP2C8P10632 490 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 PKN2Q16513 984 aaKnown RBP9.58□□□□□ -0.88
RPA1-201ENST00000254719 P3H1Q32P28 736 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 OLFML1Q6UWY5 402 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 RCOR2Q8IZ40 523 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 ARRDC4Q8NCT1 418 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 PLXNA3P51805 1871 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 ALOX15BO15296 676 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 ITGAVP06756 1048 aa9.58□□□□□ -0.88
RPA1-201ENST00000254719 RPA3P35244 121 aaPredicted RBP9.58□□□□□ -0.88
RPA1-201ENST00000254719 CSRP3P50461 194 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms