RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 NBPF20Q3BBV1 942 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 KCNT1Q5JUK3 1230 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 USP50Q70EL3 339 aaPredicted RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 FBXO36Q8NEA4 188 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 APBB2Q92870 758 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 GIMAP4Q9NUV9 329 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 VGLL3A8MV65 326 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ZSCAN9O15535 394 aaPredicted RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ADCY3O60266 1144 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ALDH2P05091 517 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ZC3H12BQ5HYM0 836 aaKnown RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 RIN2Q8WYP3 895 aaPredicted RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 AKT1S1Q96B36 256 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 RBBP8Q99708 897 aa19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ILKAPQ9H0C8 392 aaPredicted RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 ASCC2Q9H1I8 757 aaPredicted RBP19.63■□□□□ 0.73
PTPRE-201ENST00000254667 PDHA1P08559 390 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 ARMC2Q8NEN0 867 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 SYT15Q9BQS2 421 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 CKMP06732 381 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 ATP6V1E1P36543 226 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 BRSK2Q8IWQ3 736 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 ATG4AQ8WYN0 398 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 DACH2Q96NX9 599 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 P2RX7Q99572 595 aaKnown RBP19.62■□□□□ 0.73
PTPRE-201ENST00000254667 FLOT2Q14254 428 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 CNGA3Q16281 694 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 ITIH5Q86UX2 942 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 NUP93Q8N1F7 819 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 ARHGEF28Q8N1W1 1705 aaKnown RBP19.62■□□□□ 0.73
PTPRE-201ENST00000254667 SLC20A1Q8WUM9 679 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 NMRK1Q9NWW6 199 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 SYNDIG1LA6NDD5 238 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 TKTL1P51854 596 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 FAXCQ5TGI0 409 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 FBXO44Q9H4M3 255 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 WWOXQ9NZC7 414 aa19.62■□□□□ 0.73
PTPRE-201ENST00000254667 CRTAMO95727 393 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 PAEPP09466 180 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 DDR1Q08345 913 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 MFSD10Q14728 455 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 MCOLN2Q8IZK6 566 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 SNTG2Q9NY99 539 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 C16orf96A6NNT2 1141 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 KDM7AQ6ZMT4 941 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 RFX8Q6ZV50 586 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 YME1L1Q96TA2 773 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 SCUBE2Q9NQ36 999 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 DDX43Q9NXZ2 648 aaKnown RBP19.61■□□□□ 0.73
PTPRE-201ENST00000254667 SLC12A8A0AV02 714 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 EFEMP1Q12805 493 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 PTGISQ16647 500 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 IQSEC1Q6DN90 963 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 BRD8Q9H0E9 1235 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 TLR8Q9NR97 1041 aaKnown RBP19.61■□□□□ 0.73
PTPRE-201ENST00000254667 GGT7Q9UJ14 662 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 ADORA2AP29274 412 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 IRAK1P51617 712 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 ARMC6Q6NXE6 501 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 FAM131BQ86XD5 332 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 MAP4K3Q8IVH8 894 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 ENTPD7Q9NQZ7 604 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 EVPLLA8MZ36 301 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 B2RBV5 119 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 ACTN3Q08043 901 aaPredicted RBP19.61■□□□□ 0.73
PTPRE-201ENST00000254667 DENND1BQ6P3S1 775 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 RFWD2Q8NHY2 731 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 NSL1Q96IY1 281 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 OSBPL1AQ9BXW6 950 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 PDGFCQ9NRA1 345 aa19.61■□□□□ 0.73
PTPRE-201ENST00000254667 CCT8L1PA6NM43 557 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 AIM2O14862 343 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 EFCAB14O75071 495 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 RHOCP08134 193 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 PTPN7P35236 360 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 STX5Q13190 355 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 OVOS1Q6IE37 1185 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 CYP2W1Q8TAV3 490 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 PCDHB5Q9Y5E4 795 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 DUSP10Q9Y6W6 482 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 ADGRA2Q96PE1 1338 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 AKAP10O43572 662 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 ZNF556Q9HAH1 456 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 CHST12Q9NRB3 414 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 TBC1D13Q9NVG8 400 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 SLC24A2Q9UI40 661 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 MROH1Q8NDA8 1641 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 ITGALP20701 1170 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 C2CD6Q53TS8 623 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 TLK2Q86UE8 772 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 CES2O00748 559 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 MTM1Q13496 603 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 FAM9CQ8IZT9 166 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 STX19Q8N4C7 294 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 ZNF606Q8WXB4 792 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 LACRTQ9GZZ8 138 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 OSGEPQ9NPF4 335 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 GPATCH2LQ9NWQ4 482 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 BLOC1S6Q9UL45 172 aa19.6■□□□□ 0.73
PTPRE-201ENST00000254667 CCR1P32246 355 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms