RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 GEMP55040 296 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 CDH8P55286 799 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 MRPS31Q92665 395 aaKnown RBP19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 SYN2Q92777 582 aaPredicted RBP19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 PHF21AQ96BD5 680 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 MAGED4Q96JG8 741 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 GBA2Q9HCG7 927 aaPredicted RBP19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 RIC8BQ9NVN3 520 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 PARNO95453 639 aaKnown RBP19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 ALOX15P16050 662 aaPredicted RBP19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 SCNN1BP51168 640 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 NCALDP61601 193 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 MAPRE1Q15691 268 aaKnown RBP19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 AGGF1Q8N302 714 aaeCLIP19.32■□□□□ 0.682e-7■□□□□ 9.1
SMARCC1-201ENST00000254480 TMEM176AQ96HP8 235 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 C17orf75Q9HAS0 396 aa19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.32■□□□□ 0.68
SMARCC1-201ENST00000254480 H3BRB1 525 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 PDHXO00330 501 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 SPAG6O75602 509 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 PPATQ06203 517 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 PGM5Q15124 567 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 STRA8Q7Z7C7 330 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 NSL1Q96IY1 281 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 ROPN1BQ9BZX4 212 aaPredicted RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 TUT1Q9H6E5 874 aaKnown RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 ROPN1Q9HAT0 212 aaPredicted RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 CALCAP01258 141 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 DDX5P17844 614 aaKnown RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 PCNX4Q63HM2 1172 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 DCDC2CA8MYV0 355 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 EVPLLA8MZ36 301 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 F8VZ95 297 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 STX19Q8N4C7 294 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 DIS3LQ8TF46 1054 aaKnown RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 OLFM3Q96PB7 478 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 NUDT5Q9UKK9 219 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 CSHL1Q14406 222 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 SV2AQ7L0J3 742 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 DPF3Q92784 378 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 PDCD2LQ9BRP1 358 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 IL17RBQ9NRM6 502 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 WTIPA6NIX2 430 aaPredicted RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 RASSF10A6NK89 507 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 ERI2A8K979 691 aaKnown RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 PKN1Q16512 942 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 PTGISQ16647 500 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 SEMA4DQ92854 862 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 GID8Q9NWU2 228 aa19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 INO80Q9ULG1 1556 aaPredicted RBP19.31■□□□□ 0.68
SMARCC1-201ENST00000254480 GHRP10912 638 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 PCNAP12004 261 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 FDFT1P37268 417 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 PRIM2P49643 509 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 POU6F1Q14863 301 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 SEC23AQ15436 765 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 SPATC1LQ9H0A9 340 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 CARD9Q9H257 536 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 CEP170BQ9Y4F5 1589 aaPredicted RBP19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 CCT8L1PA6NM43 557 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 F8W810 466 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 SCAMP3O14828 347 aaKnown RBP19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 CPSF4O95639 269 aaKnown RBP19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 GUCA1CO95843 209 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 TRPC1P48995 793 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 MAP3K10Q02779 954 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 TMEM132BQ14DG7 1078 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 IYDQ6PHW0 289 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 CATSPER1Q8NEC5 780 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 BCAT1P54687 386 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 CCDC142Q17RM4 750 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 CES3Q6UWW8 571 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 SPOCD1Q6ZMY3 1216 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 LRRC6Q86X45 466 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 DNAJC7Q99615 494 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 GLIS2Q9BZE0 524 aaPredicted RBP19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 UNC13BO14795 1591 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 PTPRMP28827 1452 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 TBKBP1A7MCY6 615 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 AGAP9Q5VTM2 703 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 ARHGEF19Q8IW93 802 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 VMP1Q96GC9 406 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 ILKAPQ9H0C8 392 aaPredicted RBP19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 ATXN3LQ9H3M9 355 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 RHOCP08134 193 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 RHOAP61586 193 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 CNTN2Q02246 1040 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 HIST2H2ACQ16777 129 aaPredicted RBP19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 HIST2H2AA3Q6FI13 130 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 MRNIPQ6NTE8 343 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 TMC7Q7Z402 723 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 PRUNE1Q86TP1 453 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 UNC45BQ8IWX7 931 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 ZFPM1Q8IX07 1006 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 ZBTB45Q96K62 511 aaPredicted RBP19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 GIMAP4Q9NUV9 329 aa19.3■□□□□ 0.68
SMARCC1-201ENST00000254480 MTSS1O43312 755 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 URODP06132 367 aa19.29■□□□□ 0.68
SMARCC1-201ENST00000254480 AAASQ9NRG9 546 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms