RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 ALG13Q9NP73 1137 aaKnown RBP16.38■□□□□ 0.21
RFX1-201ENST00000254325 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.38■□□□□ 0.21
RFX1-201ENST00000254325 ZC3H7BQ9UGR2 993 aaKnown RBP16.38■□□□□ 0.21
RFX1-201ENST00000254325 SMAPO00193 183 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 KLF1Q13351 362 aaPredicted RBP16.38■□□□□ 0.21
RFX1-201ENST00000254325 MFSD5Q6N075 450 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 GLIS1Q8NBF1 620 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 SLC2A14Q8TDB8 520 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 NKD2Q969F2 451 aaPredicted RBP16.38■□□□□ 0.21
RFX1-201ENST00000254325 NFKBIZQ9BYH8 718 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 KIAA1217Q5T5P2 1943 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 DRD4P21917 467 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 GJA5P36382 358 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 FAM187BQ17R55 369 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 EFHC1Q5JVL4 640 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 TRPM8Q7Z2W7 1104 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 FAM131BQ86XD5 332 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 UNC45BQ8IWX7 931 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 PPCSQ9HAB8 311 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 MAGED2Q9UNF1 606 aaPredicted RBP16.38■□□□□ 0.21
RFX1-201ENST00000254325 KRT4P19013 534 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 PROZP22891 400 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 ACAT1P24752 427 aaKnown RBP16.38■□□□□ 0.21
RFX1-201ENST00000254325 IL1R2P27930 398 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 PKN2Q16513 984 aaKnown RBP16.38■□□□□ 0.21
RFX1-201ENST00000254325 EFHC2Q5JST6 749 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 RRAGCQ9HB90 399 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 ARL2BPQ9Y2Y0 163 aa16.38■□□□□ 0.21
RFX1-201ENST00000254325 PIAS1O75925 651 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 GPD2P43304 727 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 DNAJC3Q13217 504 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 B3GNT5Q9BYG0 378 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 AP4E1Q9UPM8 1137 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 LPXNO60711 386 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 SNAI1O95863 264 aaPredicted RBP16.37■□□□□ 0.21
RFX1-201ENST00000254325 RGS2P41220 211 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 ZNF200P98182 395 aaPredicted RBP16.37■□□□□ 0.21
RFX1-201ENST00000254325 FASTKD3Q14CZ7 662 aaKnown RBP16.37■□□□□ 0.21
RFX1-201ENST00000254325 ZC3H12AQ5D1E8 599 aaKnown RBP16.37■□□□□ 0.21
RFX1-201ENST00000254325 CDKL2Q92772 493 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 TXLNGYQ9BZA5 131 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 PSME4Q14997 1843 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 H3BRJ5 948 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 CYB561D2O14569 222 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 COPEO14579 308 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 PCK1P35558 622 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 SMAD1Q15797 465 aaKnown RBP16.37■□□□□ 0.21
RFX1-201ENST00000254325 UBAP2Q5T6F2 1119 aaKnown RBP16.37■□□□□ 0.21
RFX1-201ENST00000254325 ANKRD20A3Q5VUR7 823 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 NIPA2Q8N8Q9 360 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 DEPDC1BQ8WUY9 529 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 PAFAH2Q99487 392 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 LRRC4CQ9HCJ2 640 aa16.37■□□□□ 0.21
RFX1-201ENST00000254325 GOLGB1Q14789 3259 aaKnown RBP16.37■□□□□ 0.21
RFX1-201ENST00000254325 CREB1P16220 341 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 PTK7Q13308 1070 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 DPYSL3Q14195 570 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 GBP7Q8N8V2 638 aaPredicted RBP16.36■□□□□ 0.21
RFX1-201ENST00000254325 FGD4Q96M96 766 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 C16orf70Q9BSU1 422 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 DARSP14868 501 aaKnown RBP16.36■□□□□ 0.21
RFX1-201ENST00000254325 CYP2F1P24903 491 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 MAP2K5Q13163 448 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 LDLRAD1Q5T700 205 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 SH3PXD2AQ5TCZ1 1133 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 LVRNQ6Q4G3 990 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 HAUS2Q9NVX0 235 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 ELK3P41970 407 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 PMF1Q6P1K2 205 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 DNAAF3Q8N9W5 541 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 CCDC110Q8TBZ0 833 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 TSNARE1Q96NA8 513 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 TBCBQ99426 244 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 SNRNP25Q9BV90 132 aaKnown RBP16.36■□□□□ 0.21
RFX1-201ENST00000254325 KLHL8Q9P2G9 620 aaPredicted RBP16.36■□□□□ 0.21
RFX1-201ENST00000254325 SLC24A2Q9UI40 661 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 EFR3BQ9Y2G0 817 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 EZRP15311 586 aaKnown RBP16.36■□□□□ 0.21
RFX1-201ENST00000254325 CDH5P33151 784 aaPredicted RBP16.36■□□□□ 0.21
RFX1-201ENST00000254325 GTF2A1P52655 376 aaPredicted RBP16.36■□□□□ 0.21
RFX1-201ENST00000254325 PDE1BQ01064 536 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 SNCBQ16143 134 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 UNC93AQ86WB7 457 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 LRRN4Q8WUT4 740 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 RNF157Q96PX1 679 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 GOLGA2P5Q9HBQ8 144 aa16.36■□□□□ 0.21
RFX1-201ENST00000254325 AXLP30530 894 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 DEUP1Q05D60 604 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 ZNF252P-AS1Q0IIN9 211 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 ARL13BQ3SXY8 428 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 SPRYD7Q5W111 196 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 DRICH1Q6PGQ1 229 aaPredicted RBP16.35■□□□□ 0.21
RFX1-201ENST00000254325 ATP2A3Q93084 1043 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 GRAMD1AQ96CP6 724 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 CYTH4Q9UIA0 394 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 ABT1Q9ULW3 272 aaKnown RBP16.35■□□□□ 0.21
RFX1-201ENST00000254325 POLR2AP24928 1970 aaKnown RBP16.35■□□□□ 0.21
RFX1-201ENST00000254325 DOCK5Q9H7D0 1870 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 ABHD2P08910 425 aa16.35■□□□□ 0.21
RFX1-201ENST00000254325 RBL1P28749 1068 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms