RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 KCNN4O15554 427 aa26.66■■□□□ 1.86
RAB40C-201ENST00000248139 MT-ND3P03897 115 aa26.66■■□□□ 1.86
RAB40C-201ENST00000248139 PYGBP11216 843 aa26.66■■□□□ 1.86
RAB40C-201ENST00000248139 ILDR2Q71H61 639 aa26.66■■□□□ 1.86
RAB40C-201ENST00000248139 FAM49BQ9NUQ9 324 aa26.66■■□□□ 1.86
RAB40C-201ENST00000248139 ASNSD1Q9NWL6 643 aa26.66■■□□□ 1.86
RAB40C-201ENST00000248139 F5H423 210 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-201ENST00000248139 HMGCRP04035 888 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 ARF4P18085 180 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-201ENST00000248139 TFE3P19532 575 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-201ENST00000248139 GPD1P21695 349 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 SLC18A1P54219 525 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 KLHL38Q2WGJ6 581 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 CCDC62Q6P9F0 684 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 B3GNT5Q9BYG0 378 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 PDZD7Q9H5P4 517 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 CYLDQ9NQC7 956 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 WDR35Q9P2L0 1181 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 PTPRFP10586 1907 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 LPXNO60711 386 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 ZWINTO95229 277 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 C22orf31O95567 290 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 RBL1P28749 1068 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 ZNF143P52747 638 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-201ENST00000248139 SCUBE3Q8IX30 993 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 CTAGE3PQ8IX95 158 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 TRAF3IP1Q8TDR0 691 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-201ENST00000248139 TBC1D10AQ9BXI6 508 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 GINS2Q9Y248 185 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 C15orf41Q9Y2V0 281 aa26.65■■□□□ 1.86
RAB40C-201ENST00000248139 C2CD4BA6NLJ0 364 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 HCRTO43612 131 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 GM2AP17900 193 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 AMHR2Q16671 573 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 SMARCAD1Q9H4L7 1026 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 RSAD1Q9HA92 442 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 LOC285556D6RIA3 1793 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 EIF4E1BA6NMX2 242 aaKnown RBP26.64■■□□□ 1.86
RAB40C-201ENST00000248139 CXorf49A8MYA2 514 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-201ENST00000248139 UGT1A9O60656 530 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 DDNO94850 711 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-201ENST00000248139 IL18RAPO95256 599 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 ZNF286BP0CG31 522 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 NEFHP12036 1026 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 ALDH3A1P30838 453 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 ATXN1P54253 815 aaKnown RBP26.64■■□□□ 1.86
RAB40C-201ENST00000248139 KRT81Q14533 505 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 NOMO1Q15155 1222 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 PPP6R3Q5H9R7 873 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-201ENST00000248139 LONP2Q86WA8 852 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 MANSC1Q9H8J5 431 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 UGT1A7Q9HAW7 530 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 UGT1A10Q9HAW8 530 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 UGT1A8Q9HAW9 530 aa26.64■■□□□ 1.86
RAB40C-201ENST00000248139 PPEF2O14830 753 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 GAS2O43903 313 aaKnown RBP26.63■■□□□ 1.85
RAB40C-201ENST00000248139 PRPSAP2O60256 369 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 PFKMP08237 780 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 IL4RP24394 825 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 KCTD2Q14681 263 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 PMF1Q6P1K2 205 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 CDHR3Q6ZTQ4 885 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 MMP19Q99542 508 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 MIS12Q9H081 205 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 ZFP69BQ9UJL9 534 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 HBP1O60381 514 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 BGNP21810 368 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 CCDC14Q49A88 953 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 PPM1NQ8N819 430 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 NETO2Q8NC67 525 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 CCDC110Q8TBZ0 833 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 CYTH2Q99418 400 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 USP29Q9HBJ7 922 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 FBXO6Q9NRD1 293 aaPredicted RBP26.63■■□□□ 1.85
RAB40C-201ENST00000248139 IKBKGQ9Y6K9 419 aa26.63■■□□□ 1.85
RAB40C-201ENST00000248139 BRCA1P38398 1863 aaKnown RBP26.63■■□□□ 1.85
RAB40C-201ENST00000248139 DCTN3O75935 186 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 GABRB2P47870 512 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 PLD5Q8N7P1 536 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 CNPY3Q9BT09 278 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 LRMDAQ9H2I8 198 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 NOP53Q9NZM5 478 aaKnown RBP26.62■■□□□ 1.85
RAB40C-201ENST00000248139 TEX264Q9Y6I9 313 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 TRIP11Q15643 1979 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 H0Y3Z8 333 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 CCND1P24385 295 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 SKIV2L2P42285 1042 aaKnown RBP26.62■■□□□ 1.85
RAB40C-201ENST00000248139 CLNS1AP54105 237 aaKnown RBP26.62■■□□□ 1.85
RAB40C-201ENST00000248139 ZNF200P98182 395 aaPredicted RBP26.62■■□□□ 1.85
RAB40C-201ENST00000248139 KCNJ11Q14654 390 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 TMEM132DQ14C87 1099 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 PPP1R26Q5T8A7 1209 aaPredicted RBP26.62■■□□□ 1.85
RAB40C-201ENST00000248139 ACOT1Q86TX2 421 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 FAM13CQ8NE31 585 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 RNF157Q96PX1 679 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 MECRQ9BV79 373 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 APRTP07741 180 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 INHBAP08476 426 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 VDRP11473 427 aa26.62■■□□□ 1.85
RAB40C-201ENST00000248139 SMAD1Q15797 465 aaKnown RBP26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms