RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 GOLGA7BQ2TAP0 167 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 RARS2Q5T160 578 aaKnown RBP9.63□□□□□ -0.87
COL21A1-201ENST00000244728 EMC10Q5UCC4 262 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 RDM1Q8NG50 284 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 SLC7A14Q8TBB6 771 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 ACTL9Q8TC94 416 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 NMD3Q96D46 503 aaKnown RBP9.63□□□□□ -0.87
COL21A1-201ENST00000244728 CDCA5Q96FF9 252 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 PCDHB18PQ96TA0 734 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 ZNF184Q99676 751 aaPredicted RBP9.63□□□□□ -0.87
COL21A1-201ENST00000244728 LRMDAQ9H2I8 198 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 BCAS3Q9H6U6 928 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 SIX2Q9NPC8 291 aa9.63□□□□□ -0.87
COL21A1-201ENST00000244728 TUBGCP6Q96RT7 1819 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ARHGEF37A1IGU5 675 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 PSMD10O75832 226 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 GJB1P08034 283 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ECHS1P30084 290 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 TPI1P60174 286 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 BMT2Q1RMZ1 405 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 TFDP3Q5H9I0 405 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 DLK2Q6UY11 383 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 C15orf52Q6ZUT6 534 aaKnown RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 TRABD2AQ86V40 505 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 MAB21L3Q8N8X9 362 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 CDC26Q8NHZ8 85 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 PABPC5Q96DU9 382 aaKnown RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 VPS39Q96JC1 886 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 PRDM5Q9NQX1 630 aaPredicted RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ARHGEF3Q9NR81 526 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 RHBDL2Q9NX52 303 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 DPP3Q9NY33 737 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ROBO3Q96MS0 1386 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ASTN2O75129 1339 aaPredicted RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 EDF1O60869 148 aaKnown RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 AKAP5P24588 427 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 RFC1P35251 1148 aaPredicted RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 TAP1Q03518 808 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 VGLL4Q14135 290 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 METTL7BQ6UX53 244 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 SPOCD1Q6ZMY3 1216 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 TRIM67Q6ZTA4 783 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 OTOAQ7RTW8 1153 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 CPNE8Q86YQ8 564 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 NMRK1Q9NWW6 199 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ATP8B3O60423 1300 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 BAZ2AQ9UIF9 1905 aaKnown RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 YDJCA8MPS7 323 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 TM9SF1O15321 606 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 CYP1A2P05177 515 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 MX2P20592 715 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 OCRLQ01968 901 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 RNF220Q5VTB9 566 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 TTC39BQ5VTQ0 682 aaPredicted RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 VSIG10LQ86VR7 867 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ZNF606Q8WXB4 792 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 OXNAD1Q96HP4 312 aaPredicted RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 CLMNQ96JQ2 1002 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ZNF570Q96NI8 536 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 FAM96AQ9H5X1 160 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 C10orf88Q9H8K7 445 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 WDR35Q9P2L0 1181 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 SHOC2Q9UQ13 582 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 R3HDM2Q9Y2K5 976 aaKnown RBP9.62□□□□□ -0.87
COL21A1-201ENST00000244728 ZNF711Q9Y462 761 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 RIPK3Q9Y572 518 aa9.62□□□□□ -0.87
COL21A1-201ENST00000244728 A0A1W2PPM1 405 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 BANF1O75531 89 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 NCAM1P13591 858 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 GARTP22102 1010 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 OR1G1P47890 313 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 GCLCP48506 637 aaPredicted RBP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 VCPP55072 806 aaKnown RBP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 TRMT5Q32P41 509 aaKnown RBP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 ATP13A4Q4VNC1 1196 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 TMCO4Q5TGY1 634 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 VSTM1Q6UX27 236 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 FAM131BQ86XD5 332 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 TMPRSS6Q8IU80 811 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 FAM71AQ8IYT1 594 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 GALNT4Q8N4A0 578 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 TRPM4Q8TD43 1214 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 DENND2DQ9H6A0 471 aaPredicted RBP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 FBXO6Q9NRD1 293 aaPredicted RBP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 AIM2O14862 343 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 PFDN6O15212 129 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 TADA2AO75478 443 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 WFS1O76024 890 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 CDK16Q00536 496 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 NSUN2Q08J23 767 aaKnown RBP eCLIP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 IL31Q6EBC2 164 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 LLGL2Q6P1M3 1020 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 ARHGAP22Q7Z5H3 698 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 EFHD1Q9BUP0 239 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 CYP3A7-CYP3A51PA0A087WV96 503 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 C2CD2LO14523 706 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 NEMP1O14524 444 aa9.61□□□□□ -0.87
COL21A1-201ENST00000244728 LIN7AO14910 233 aaPredicted RBP9.61□□□□□ -0.87
COL21A1-201ENST00000244728 CYP3A7P24462 503 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms