RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 HNRNPABQ99729 332 aaKnown RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 C11orf84Q9BUA3 381 aaPredicted RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 DNAI2Q9GZS0 605 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 NGRNQ9NPE2 291 aaKnown RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 SLC12A6Q9UHW9 1150 aa19.34■□□□□ 0.69
HOXC11-201ENST00000243082 TPX2Q9ULW0 747 aaKnown RBP19.34■□□□□ 0.69
HOXC11-201ENST00000243082 RPLP2P05387 115 aaKnown RBP19.33■□□□□ 0.68
HOXC11-201ENST00000243082 THP07101 528 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 TFE3P19532 575 aaPredicted RBP19.33■□□□□ 0.68
HOXC11-201ENST00000243082 IL4RP24394 825 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 CST5P28325 142 aaPredicted RBP19.33■□□□□ 0.68
HOXC11-201ENST00000243082 MDH1P40925 334 aaKnown RBP19.33■□□□□ 0.68
HOXC11-201ENST00000243082 ACADSBP45954 432 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 GDF10P55107 478 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 HDAC4P56524 1084 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 PPP2R2AP63151 447 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 PTGISQ16647 500 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 SCYL2Q6P3W7 929 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 ARCQ7LC44 396 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 MRPL10Q7Z7H8 261 aaKnown RBP19.33■□□□□ 0.68
HOXC11-201ENST00000243082 CROCCP2Q86T23 111 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 HACE1Q8IYU2 909 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 FUKQ8N0W3 1084 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 ADAM33Q9BZ11 813 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 FOXP3Q9BZS1 431 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 NINJ2Q9NZG7 142 aa19.33■□□□□ 0.68
HOXC11-201ENST00000243082 ARL5CA6NH57 179 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 AOC2O75106 756 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 IFNB1P01574 187 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 PTPN1P18031 435 aaKnown RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 ACAT1P24752 427 aaKnown RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 PTPN9P43378 593 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 RNASEH2BQ5TBB1 312 aaKnown RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 KIAA0319Q5VV43 1072 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 PAQR9Q6ZVX9 377 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 TEKT4Q8WW24 435 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 SENP8Q96LD8 212 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 ROPN1BQ9BZX4 212 aaPredicted RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 ROPN1Q9HAT0 212 aaPredicted RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 PADI3Q9ULW8 664 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 GIT1Q9Y2X7 761 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 SMIM23A6NLE4 172 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 RASGRF2O14827 1237 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 XPO1O14980 1071 aaKnown RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 MGEA5O60502 916 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 CD52P31358 61 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 CLCNKBP51801 687 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 SP3Q02447 781 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 PDK2Q15119 407 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 ZC3H12AQ5D1E8 599 aaKnown RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 TNFAIP8L3Q5GJ75 292 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 SMC1BQ8NDV3 1235 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 CENPIQ92674 756 aaPredicted RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 RNF157Q96PX1 679 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 TBCBQ99426 244 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 MAK16Q9BXY0 300 aaKnown RBP19.32■□□□□ 0.68
HOXC11-201ENST00000243082 DUSP16Q9BY84 665 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 GPATCH2LQ9NWQ4 482 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 CASP8AP2Q9UKL3 1982 aa19.32■□□□□ 0.68
HOXC11-201ENST00000243082 CLDN5O00501 218 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 RGS16O15492 202 aaPredicted RBP19.31■□□□□ 0.68
HOXC11-201ENST00000243082 SLCO1A2P46721 670 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 IFI35P80217 286 aaPredicted RBP19.31■□□□□ 0.68
HOXC11-201ENST00000243082 NOGQ13253 232 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 AUHQ13825 339 aaKnown RBP19.31■□□□□ 0.68
HOXC11-201ENST00000243082 MORF4L2Q15014 288 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 CA9Q16790 459 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 FOXR1Q6PIV2 292 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 NPNTQ6UXI9 565 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 PIGZQ86VD9 579 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 UNC45BQ8IWX7 931 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 RBM15Q96T37 977 aaKnown RBP eCLIP19.31■□□□□ 0.68
HOXC11-201ENST00000243082 SNRNP25Q9BV90 132 aaKnown RBP19.31■□□□□ 0.68
HOXC11-201ENST00000243082 PCDH18Q9HCL0 1135 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 HTTP42858 3142 aa19.31■□□□□ 0.68
HOXC11-201ENST00000243082 KIF3CO14782 793 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 CAPN15O75808 1086 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 BEST1O76090 585 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 GHRP10912 638 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 LSP1P33241 339 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 SCNN1GP51170 649 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 EIF3EP60228 445 aaKnown RBP19.3■□□□□ 0.68
HOXC11-201ENST00000243082 KRT81Q14533 505 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 MAP7D3Q8IWC1 876 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 C3orf58Q8NDZ4 430 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 SPATA18Q8TC71 538 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 NCAPGQ9BPX3 1015 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 ZMYND15Q9H091 742 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 MDM4O15151 490 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 ZNF623O75123 536 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 AGTP01019 485 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 IVLP07476 585 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 TFDP2Q14188 446 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 DSC3Q14574 896 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 NOMO1Q15155 1222 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 MFSD5Q6N075 450 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 RSAD2Q8WXG1 361 aa19.3■□□□□ 0.68
HOXC11-201ENST00000243082 FARP1Q9Y4F1 1045 aaPredicted RBP19.3■□□□□ 0.68
HOXC11-201ENST00000243082 MCF2LO15068 1137 aa19.29■□□□□ 0.68
HOXC11-201ENST00000243082 RBP3P10745 1247 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms