RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 ATMINO43313 823 aaPredicted RBP13.87□□□□□ -0.19
SLIRP-201ENST00000238688 KRT7P08729 469 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 KRT3P12035 628 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 CXCR5P32302 372 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 SSTR3P32745 418 aaPredicted RBP13.87□□□□□ -0.19
SLIRP-201ENST00000238688 SOX4Q06945 474 aaPredicted RBP13.87□□□□□ -0.19
SLIRP-201ENST00000238688 DHX34Q14147 1143 aaKnown RBP13.87□□□□□ -0.19
SLIRP-201ENST00000238688 PTPN20Q4JDL3 420 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 DENND1BQ6P3S1 775 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 DCLRE1AQ6PJP8 1040 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 TMCO3Q6UWJ1 677 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 METTL23Q86XA0 190 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 VSIG1Q86XK7 387 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 ZNF280BQ86YH2 543 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 NOA1Q8NC60 698 aaKnown RBP13.87□□□□□ -0.19
SLIRP-201ENST00000238688 B3GALNT2Q8NCR0 500 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 LRRN4CLQ8ND94 238 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 ELMO3Q96BJ8 720 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 ZFP42Q96MM3 310 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 TCF25Q9BQ70 676 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 MRPL45Q9BRJ2 306 aaKnown RBP13.87□□□□□ -0.19
SLIRP-201ENST00000238688 VN1R3Q9BXE9 311 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 PARD6BQ9BYG5 372 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 UBXN6Q9BZV1 441 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 STIM2Q9P246 746 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 FEZ2Q9UHY8 353 aaPredicted RBP13.87□□□□□ -0.19
SLIRP-201ENST00000238688 CDH9Q9ULB4 789 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 L1RE1Q9UN81 338 aa13.87□□□□□ -0.19
SLIRP-201ENST00000238688 C2orf71A6NGG8 1288 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 M0QZQ0 153 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 KRIT1O00522 736 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 TRAPPC3O43617 180 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 GALTP07902 379 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 CHRNA3P32297 505 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 PCK1P35558 622 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 PPM1AP35813 382 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 PLA2G4AP47712 749 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 PSMC1P62191 440 aaKnown RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 CYP1B1Q16678 543 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 HADHQ16836 314 aaKnown RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 NOMO2Q5JPE7 1267 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 SCARA3Q6AZY7 606 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 SYCE2Q6PIF2 218 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 XYLT1Q86Y38 959 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 DNAAF5Q86Y56 855 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 IFT20Q8IY31 132 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 RCOR2Q8IZ40 523 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 C12orf50Q8NA57 414 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 SLC35F5Q8WV83 523 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 SUSD6Q92537 303 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 ALG3Q92685 438 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 SENP8Q96LD8 212 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 CDCA3Q99618 268 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 OXCT2Q9BYC2 517 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 MRPL9Q9BYD2 267 aaKnown RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 FRMD8P1Q9BZ68 369 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 S1PR5Q9H228 398 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 DNAJB4Q9UDY4 337 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 HMGXB4Q9UGU5 601 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 FAM50BQ9Y247 325 aa13.86□□□□□ -0.19
SLIRP-201ENST00000238688 USP15Q9Y4E8 981 aaPredicted RBP13.86□□□□□ -0.19
SLIRP-201ENST00000238688 FAM187AA6NFU0 413 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 DPYSL4O14531 572 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 PPEF2O14830 753 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 XPO1O14980 1071 aaKnown RBP13.85□□□□□ -0.19
SLIRP-201ENST00000238688 RNF8O76064 485 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 DDHD2O94830 711 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 FGGP02679 453 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 GLI1P08151 1106 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 CFHP08603 1231 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 SLC11A1P49279 550 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 FNTAP49354 379 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 SCNN1GP51170 649 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 DSC1Q08554 894 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 CUL1Q13616 776 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 LONRF2Q1L5Z9 754 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 GOLGA7BQ2TAP0 167 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 TMEM31Q5JXX7 168 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 FBXO38Q6PIJ6 1188 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 SYDE1Q6ZW31 735 aaPredicted RBP13.85□□□□□ -0.19
SLIRP-201ENST00000238688 ACOT1Q86TX2 421 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 MRPL43Q8N983 215 aaKnown RBP13.85□□□□□ -0.19
SLIRP-201ENST00000238688 KCTD13Q8WZ19 329 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 SLCO2A1Q92959 643 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 IGSF21Q96ID5 467 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 SUSD3Q96L08 255 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 CPXM1Q96SM3 734 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 PSMB7Q99436 277 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 ACBD6Q9BR61 282 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 CNPY3Q9BT09 278 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 TRIM62Q9BVG3 475 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 GOLPH3Q9H4A6 298 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 PNPLA8Q9NP80 782 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 NGRNQ9NPE2 291 aaKnown RBP13.85□□□□□ -0.19
SLIRP-201ENST00000238688 RBM12Q9NTZ6 932 aaKnown RBP13.85□□□□□ -0.19
SLIRP-201ENST00000238688 ASNSD1Q9NWL6 643 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.85□□□□□ -0.19
SLIRP-201ENST00000238688 RASAL2Q9UJF2 1139 aa13.85□□□□□ -0.19
SLIRP-201ENST00000238688 INPP5FQ9Y2H2 1132 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms