RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 ITM2BQ9Y287 266 aa5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 RRP15Q9Y3B9 282 aaKnown RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 MAGED1Q9Y5V3 778 aaPredicted RBP5.68□□□□□ -1.5
TRAPPC13-201ENST00000231526 CASP8AP2Q9UKL3 1982 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 SMIM28A0A1B0GU29 152 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 TARSL2A2RTX5 802 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 CCDC66A2RUB6 948 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 PPEF2O14830 753 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 XPOTO43592 962 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 CALB1P05937 261 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 HNRNPCP07910 306 aaKnown RBP eCLIP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ATF7P17544 494 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 MMP8P22894 467 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 SERPINB3P29508 390 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 NDST1P52848 882 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 RAD23BP54727 409 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 RPL7AP62424 266 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 MAMLD1Q13495 774 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 COX20Q5RI15 118 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 SEL1L2Q5TEA6 688 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 DCAF12L1Q5VU92 463 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 DAB2IPQ5VWQ8 1189 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 PPP1R2P3Q6NXS1 205 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 AADACL2Q6P093 401 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 WDR93Q6P2C0 686 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 PHF13Q86YI8 300 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 CPNE8Q86YQ8 564 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 GIMAP1Q8WWP7 306 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 WNT8BQ93098 351 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 FAXDC2Q96IV6 333 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 GLT1D1Q96MS3 346 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 GDAP1L1Q96MZ0 367 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 NAP1L3Q99457 506 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZSWIM1Q9BR11 485 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 PLVAPQ9BX97 442 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 NT5C1AQ9BXI3 368 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 CFHR5Q9BXR6 569 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 WNT8AQ9H1J5 351 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 CYP3A43Q9HB55 503 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ST7Q9NRC1 585 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 PARVAQ9NVD7 372 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 STIM2Q9P246 746 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 BARX2Q9UMQ3 279 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 FCF1Q9Y324 198 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 TRPV2Q9Y5S1 764 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 GOLGA6L10A0A0M3HER8 536 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 M0QYV0 167 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 DDX3YO15523 660 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 SART1O43290 800 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 FBXO24O75426 580 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 HEXIM1O94992 359 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 GJB6O95452 261 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 LSM8O95777 96 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 CHRNA1P02708 482 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 PAEPP09466 180 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ITGA4P13612 1032 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ATF4P18848 351 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 STT3AP46977 705 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ITGA7Q13683 1181 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 SGO2Q562F6 1265 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 FBXO47Q5MNV8 452 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 BEND6Q5SZJ8 279 aaPredicted RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 SERINC5Q86VE9 423 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ETFBKMTQ8IXQ9 262 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 GSPT2Q8IYD1 628 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 RASGEF1CQ8N431 466 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 C12orf29Q8N999 325 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 SLC4A11Q8NBS3 891 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 OR6B3Q8NGW1 331 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZBTB9Q96C00 473 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZFP42Q96MM3 310 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 MCEEQ96PE7 176 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZNF518BQ9C0D4 1074 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 UPF3AQ9H1J1 476 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 TRMT13Q9NUP7 481 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 DDX20Q9UHI6 824 aaKnown RBP5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 AMACRQ9UHK6 382 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 DERAQ9Y315 318 aa5.67□□□□□ -1.5
TRAPPC13-201ENST00000231526 KLHL33A6NCF5 533 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZSCAN5CA6NGD5 496 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 MEIS3P2A8K0S8 358 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GOLGA8SH3BPF8 625 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 CCDC188H7C350 402 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 MYCP01106 439 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 CD4P01730 458 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GHRP10912 638 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 PYGMP11217 842 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 VARSP26640 1264 aaKnown RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GJC1P36383 396 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 VEGFBP49765 207 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 RWDD2BP57060 319 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 GUCY2DQ02846 1103 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 ZBTB6Q15916 424 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 KCTD19Q17RG1 926 aaPredicted RBP5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 PTPN20Q4JDL3 420 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 UBXN11Q5T124 520 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 CYP4A22Q5TCH4 519 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 C9orf57Q5W0N0 161 aa5.66□□□□□ -1.5
TRAPPC13-201ENST00000231526 PLEKHA7Q6IQ23 1121 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms