RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 EGFL8Q99944 293 aa14.27□□□□□ -0.12
HCFC2-201ENST00000229330 FESP07332 822 aa14.27□□□□□ -0.12
HCFC2-201ENST00000229330 LAMC2Q13753 1193 aa14.27□□□□□ -0.12
HCFC2-201ENST00000229330 TSPAN14Q8NG11 270 aa14.27□□□□□ -0.12
HCFC2-201ENST00000229330 RNPEPQ9H4A4 650 aa14.27□□□□□ -0.12
HCFC2-201ENST00000229330 MST1RQ04912 1400 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 LCP1P13796 627 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 CCDC130P13994 396 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 FDFT1P37268 417 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 ITGA9Q13797 1035 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 RNF146Q9NTX7 359 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 RNF225M0QZC1 329 aaPredicted RBP14.27□□□□□ -0.13
HCFC2-201ENST00000229330 DGAT1O75907 488 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 FASP25445 335 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 RGS7P49802 495 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 MTTPP55157 894 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 TPI1P60174 286 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 CLEC16AQ2KHT3 1053 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 SEPT8Q92599 483 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 ART4Q93070 314 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 ZBED2Q9BTP6 218 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 C1orf50Q9BV19 199 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 SORCS3Q9UPU3 1222 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 AK5Q9Y6K8 562 aa14.27□□□□□ -0.13
HCFC2-201ENST00000229330 EPHB6O15197 1021 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 PHKA2P46019 1235 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 PDK1Q15118 436 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 SGF29Q96ES7 293 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 SH3GLB1Q9Y371 365 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 HUS1O60921 280 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 RAB14P61106 215 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 STILQ15468 1287 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 ANO4Q32M45 955 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 CEP78Q5JTW2 689 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 TTC27Q6P3X3 843 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 CDRT15Q96T59 188 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 UBAP1Q9NZ09 502 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 RPS6KL1Q9Y6S9 549 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 ZSCAN9O15535 394 aaPredicted RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 TTKP33981 857 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 ELK3P41970 407 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 CUL2Q13617 745 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 KRT72Q14CN4 511 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 TAGAPQ8N103 731 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 HMG20AQ9NP66 347 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 CHST7Q9NS84 486 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 R3HDM2Q9Y2K5 976 aaKnown RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 SDR42E2A6NKP2 422 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 C2CD2LO14523 706 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 EXTL3O43909 919 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 LZTS3O60299 673 aaPredicted RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 GRAP2O75791 330 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 LCA5LO95447 670 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 SOX6P35712 828 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 PRKCIP41743 596 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 CHRNB3Q05901 458 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 SPOUT1Q5T280 376 aaKnown RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 ZNF618Q5T7W0 954 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 KCNV1Q6PIU1 500 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 BEST2Q8NFU1 509 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 BAP1Q92560 729 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 DLG3Q92796 817 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 TMA7Q9Y2S6 64 aaKnown RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 TLR2O60603 784 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 FLT3P36888 993 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 SULT1E1P49888 294 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 MRPS22P82650 360 aaKnown RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 MAPK11Q15759 364 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 STXBP2Q15833 593 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 N4BP2L1Q5TBK1 243 aaPredicted RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 ARMCX6Q7L4S7 300 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 TRIM69Q86WT6 500 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 ETNPPLQ8TBG4 499 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 NSUN6Q8TEA1 469 aaKnown RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 RBBP8Q99708 897 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 FBXO40Q9UH90 709 aa14.26□□□□□ -0.13
HCFC2-201ENST00000229330 RSL24D1Q9UHA3 163 aaKnown RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 VIRMAQ69YN4 1812 aaKnown RBP14.26□□□□□ -0.13
HCFC2-201ENST00000229330 KDM6AO15550 1401 aaPredicted RBP14.25□□□□□ -0.13
HCFC2-201ENST00000229330 A0A1B0GW55 424 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 DFFAO00273 331 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 DUX4L2P0CJ85 424 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 DUX4L3P0CJ86 424 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 DUX4L4P0CJ87 422 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 DUX4L5P0CJ88 424 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 DUX4L6P0CJ89 424 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 DUX4L7P0CJ90 424 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 EFNA5P52803 228 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 FUT11Q495W5 492 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 BOLA3Q53S33 107 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 TMEM63BQ5T3F8 832 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 AADACL2Q6P093 401 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 APOBEC3FQ8IUX4 373 aaKnown RBP14.25□□□□□ -0.13
HCFC2-201ENST00000229330 DUX4Q9UBX2 424 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 PXDNQ92626 1479 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 FAM237BA0A1B0GVD1 139 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 RGS5O15539 181 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 FKBP9O95302 570 aa14.25□□□□□ -0.13
HCFC2-201ENST00000229330 PTGER2P43116 358 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms