RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 FBXL18Q96ME1 805 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 ZDHHC15Q96MV8 337 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 C7orf26Q96N11 449 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 APOL6Q9BWW8 343 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 CCPG1Q9ULG6 757 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 QSER1Q2KHR3 1735 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 SMIM31A0A1B0GVY4 71 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 KLF11O14901 512 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 PDE5AO76074 875 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 FAM200BP0CF97 657 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 RBP3P10745 1247 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 MMP8P22894 467 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 GMPSP49915 693 aaPredicted RBP10.07□□□□□ -0.8
TUBB1-201ENST00000217133 STX3Q13277 289 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 SFT2D3Q587I9 215 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 MAP3K21Q5TCX8 1036 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 WDR78Q5VTH9 848 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 DARS2Q6PI48 645 aaKnown RBP10.07□□□□□ -0.8
TUBB1-201ENST00000217133 CDHR3Q6ZTQ4 885 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 PDSS2Q86YH6 399 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 IGDCC3Q8IVU1 814 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 WDR75Q8IWA0 830 aaKnown RBP10.07□□□□□ -0.8
TUBB1-201ENST00000217133 UNC45BQ8IWX7 931 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 TMEM35BQ8NCS4 154 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 ICA1LQ8NDH6 482 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 IL31RAQ8NI17 732 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 FAM172AQ8WUF8 416 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 ZNF606Q8WXB4 792 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 HAPLN3Q96S86 360 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 WDR83Q9BRX9 315 aaKnown RBP10.07□□□□□ -0.8
TUBB1-201ENST00000217133 CALN1Q9BXU9 219 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 SHCBP1LQ9BZQ2 653 aa10.07□□□□□ -0.8
TUBB1-201ENST00000217133 CYB561D2O14569 222 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 VCLP18206 1134 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 STIP1P31948 543 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 AQP4P55087 323 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 USP46P62068 366 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 BMPR2Q13873 1038 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 PDK3Q15120 406 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 TKFCQ3LXA3 575 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 ZACNQ401N2 412 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 CYP4A22Q5TCH4 519 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 TDRD10Q5VZ19 366 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 OLFML2BQ68BL8 750 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 ZCCHC23Q6ZST2 131 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 C4orf19Q8IY42 314 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 FAF2Q96CS3 445 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 AGO4Q9HCK5 861 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 TBC1D22BQ9NU19 505 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 FBXO28Q9NVF7 368 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 NDUFA13Q9P0J0 144 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 PCSK1NQ9UHG2 260 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 PLA2G4CQ9UP65 541 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 LTBP1Q14766 1721 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 E7ESA3 106 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 OR6B1O95007 311 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 TSHRP16473 764 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 GARTP22102 1010 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 PEX2P28328 305 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 OGDHQ02218 1023 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 MAP3K10Q02779 954 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 KYAT3Q6YP21 454 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 CPXCR1Q8N123 301 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 KCTD6Q8NC69 237 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 BSNDQ8WZ55 320 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 RHBDL2Q9NX52 303 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 CNTN3Q9P232 1028 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 FZD1Q9UP38 647 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 PHF24Q9UPV7 400 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 APOBEC2Q9Y235 224 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 PLLPQ9Y342 182 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 LRRC37AA6NMS7 1700 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 DHX15O43143 795 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 HNRNPRO43390 633 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 EXTL3O43909 919 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 SPAG6O75602 509 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 KRT38O76015 456 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 STK10O94804 968 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 LYPLA2O95372 231 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 IL1BP01584 269 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 SERPINA6P08185 405 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 KRT7P08729 469 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 EIF2AK2P19525 551 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 ACO1P21399 889 aaKnown RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 TBXAS1P24557 533 aaPredicted RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 HIRAP54198 1017 aaPredicted RBP10.06□□□□□ -0.8
TUBB1-201ENST00000217133 NRLP54845 237 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 PDE1BQ01064 536 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 SP4Q02446 784 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 ZNF252P-AS1Q0IIN9 211 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 DLG1Q12959 904 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 NDUFAF2Q8N183 169 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 PIP4K2CQ8TBX8 421 aa10.06□□□□□ -0.8
TUBB1-201ENST00000217133 WDR64B1ANS9 1081 aa10.05□□□□□ -0.8
TUBB1-201ENST00000217133 H7C0C1 242 aa10.05□□□□□ -0.8
TUBB1-201ENST00000217133 SOCS7O14512 581 aa10.05□□□□□ -0.8
TUBB1-201ENST00000217133 BUD23O43709 281 aaKnown RBP10.05□□□□□ -0.8
TUBB1-201ENST00000217133 YY1P25490 414 aa10.05□□□□□ -0.8
TUBB1-201ENST00000217133 RGS2P41220 211 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms