RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RASGRF2O14827 1237 aa31.04■■■□□ 2.56
PABPN1-201ENST00000216727 XPO1O14980 1071 aaKnown RBP31.04■■■□□ 2.56
PABPN1-201ENST00000216727 CCND3P30281 292 aaPredicted RBP31.04■■■□□ 2.56
PABPN1-201ENST00000216727 TTC19Q6DKK2 380 aaPredicted RBP31.04■■■□□ 2.56
PABPN1-201ENST00000216727 MFSD5Q6N075 450 aa31.04■■■□□ 2.56
PABPN1-201ENST00000216727 AGO3Q9H9G7 860 aaKnown RBP31.04■■■□□ 2.56
PABPN1-201ENST00000216727 MDM4O15151 490 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 RGS16O15492 202 aaPredicted RBP31.03■■■□□ 2.56
PABPN1-201ENST00000216727 ACSL3O95573 720 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 AGTP01019 485 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 HNRNPH2P55795 449 aaKnown RBP31.03■■■□□ 2.56
PABPN1-201ENST00000216727 GUCY1A3Q02108 690 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 TNFAIP8L3Q5GJ75 292 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 SMC1BQ8NDV3 1235 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 UHMK1Q8TAS1 419 aaKnown RBP31.03■■■□□ 2.56
PABPN1-201ENST00000216727 CENPIQ92674 756 aaPredicted RBP31.03■■■□□ 2.56
PABPN1-201ENST00000216727 STMN4Q9H169 189 aaPredicted RBP31.03■■■□□ 2.56
PABPN1-201ENST00000216727 NINJ2Q9NZG7 142 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 SRRM3A6NNA2 597 aaPredicted RBP31.03■■■□□ 2.56
PABPN1-201ENST00000216727 PRKAR2AP13861 404 aaKnown RBP31.03■■■□□ 2.56
PABPN1-201ENST00000216727 TKTP29401 623 aaKnown RBP31.03■■■□□ 2.56
PABPN1-201ENST00000216727 NOGQ13253 232 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 PTGISQ16647 500 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 PWWP2AQ96N64 755 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 DUSP16Q9BY84 665 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 SHOC2Q9UQ13 582 aa31.03■■■□□ 2.56
PABPN1-201ENST00000216727 TLDC2A0PJX2 215 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 THPOP40225 353 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 HDAC4P56524 1084 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 CAP1Q01518 475 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 KYNUQ16719 465 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 RNASEH2BQ5TBB1 312 aaKnown RBP31.02■■■□□ 2.56
PABPN1-201ENST00000216727 WSCD1Q658N2 575 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 PCGF5Q86SE9 256 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 FUKQ8N0W3 1084 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 EPS8L3Q8TE67 593 aaKnown RBP31.02■■■□□ 2.56
PABPN1-201ENST00000216727 RNF157Q96PX1 679 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 RBM15Q96T37 977 aaKnown RBP eCLIP31.02■■■□□ 2.561e-11■□□□□ 9.2
PABPN1-201ENST00000216727 ZNF487B1APH4 448 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 MCF2LO15068 1137 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 ZNF623O75123 536 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 IFNB1P01574 187 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 LCP1P13796 627 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 PECAM1P16284 738 aaPredicted RBP31.02■■■□□ 2.56
PABPN1-201ENST00000216727 PTPN1P18031 435 aaKnown RBP31.02■■■□□ 2.56
PABPN1-201ENST00000216727 LSP1P33241 339 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 SLC8A3P57103 927 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 MMRN1Q13201 1228 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 KRT81Q14533 505 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 SCYL2Q6P3W7 929 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 AGMOQ6ZNB7 445 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 TMEM86AQ8N2M4 240 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 PCSK9Q8NBP7 692 aaKnown RBP31.02■■■□□ 2.56
PABPN1-201ENST00000216727 CLEC4CQ8WTT0 213 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 SENP8Q96LD8 212 aa31.02■■■□□ 2.56
PABPN1-201ENST00000216727 CNOT10Q9H9A5 744 aaKnown RBP31.02■■■□□ 2.56
PABPN1-201ENST00000216727 DNAJC17Q9NVM6 304 aaKnown RBP31.02■■■□□ 2.56
PABPN1-201ENST00000216727 ARL5CA6NH57 179 aa31.01■■■□□ 2.55
PABPN1-201ENST00000216727 TCEA3O75764 348 aa31.01■■■□□ 2.55
PABPN1-201ENST00000216727 EIF3EP60228 445 aaKnown RBP31.01■■■□□ 2.55
PABPN1-201ENST00000216727 SP3Q02447 781 aa31.01■■■□□ 2.55
PABPN1-201ENST00000216727 RSAD2Q8WXG1 361 aa31.01■■■□□ 2.55
PABPN1-201ENST00000216727 MIOSQ9NXC5 875 aa31.01■■■□□ 2.55
PABPN1-201ENST00000216727 CWC15Q9P013 229 aaKnown RBP31.01■■■□□ 2.55
PABPN1-201ENST00000216727 PADI3Q9ULW8 664 aa31.01■■■□□ 2.55
PABPN1-201ENST00000216727 IL4RP24394 825 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 RAB27AP51159 221 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 AUHQ13825 339 aaKnown RBP31■■■□□ 2.55
PABPN1-201ENST00000216727 NOMO1Q15155 1222 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 SKIDA1Q1XH10 827 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 EFHC1Q5JVL4 640 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 SPATA18Q8TC71 538 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 LPPQ93052 612 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 SERPINB12Q96P63 405 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 RPL9P32969 192 aaKnown RBP31■■■□□ 2.55
PABPN1-201ENST00000216727 AFF1P51825 1210 aaKnown RBP31■■■□□ 2.55
PABPN1-201ENST00000216727 GDF10P55107 478 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 PIGZQ86VD9 579 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 SNRNP25Q9BV90 132 aaKnown RBP31■■■□□ 2.55
PABPN1-201ENST00000216727 PCDH18Q9HCL0 1135 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 RNF186Q9NXI6 227 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 CALCOCO1Q9P1Z2 691 aa31■■■□□ 2.55
PABPN1-201ENST00000216727 FARP1Q9Y4F1 1045 aaPredicted RBP31■■■□□ 2.55
PABPN1-201ENST00000216727 ATP2C2O75185 946 aa30.99■■■□□ 2.55
PABPN1-201ENST00000216727 RBP3P10745 1247 aa30.99■■■□□ 2.55
PABPN1-201ENST00000216727 NPR3P17342 541 aa30.99■■■□□ 2.55
PABPN1-201ENST00000216727 LHX1P48742 406 aa30.99■■■□□ 2.55
PABPN1-201ENST00000216727 KCTD13Q8WZ19 329 aa30.99■■■□□ 2.55
PABPN1-201ENST00000216727 P3H4Q92791 437 aa30.99■■■□□ 2.55
PABPN1-201ENST00000216727 ZNF670Q9BS34 389 aa30.99■■■□□ 2.55
PABPN1-201ENST00000216727 ABHD2P08910 425 aa30.98■■■□□ 2.55
PABPN1-201ENST00000216727 ELNP15502 786 aa30.98■■■□□ 2.55
PABPN1-201ENST00000216727 CD52P31358 61 aa30.98■■■□□ 2.55
PABPN1-201ENST00000216727 MAGEA4P43358 317 aa30.98■■■□□ 2.55
PABPN1-201ENST00000216727 CLCNKBP51801 687 aa30.98■■■□□ 2.55
PABPN1-201ENST00000216727 CCDC142Q17RM4 750 aa30.98■■■□□ 2.55
PABPN1-201ENST00000216727 PAQR9Q6ZVX9 377 aa30.98■■■□□ 2.55
PABPN1-201ENST00000216727 TRAF3IP1Q8TDR0 691 aaPredicted RBP30.98■■■□□ 2.55
PABPN1-201ENST00000216727 FAF2Q96CS3 445 aa30.98■■■□□ 2.55
PABPN1-201ENST00000216727 SMIM23A6NLE4 172 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms