RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 TLL1O43897 1013 aa23.12■■□□□ 1.29
HOXC8-201ENST00000040584 RPL7AP62424 266 aaKnown RBP23.12■■□□□ 1.29
HOXC8-201ENST00000040584 ZNF268Q14587 947 aaPredicted RBP23.12■■□□□ 1.29
HOXC8-201ENST00000040584 ANKS3Q6ZW76 656 aa23.12■■□□□ 1.29
HOXC8-201ENST00000040584 DCP1BQ8IZD4 617 aaKnown RBP23.12■■□□□ 1.29
HOXC8-201ENST00000040584 IQCKQ8N0W5 287 aa23.12■■□□□ 1.29
HOXC8-201ENST00000040584 RIN2Q8WYP3 895 aaPredicted RBP23.12■■□□□ 1.29
HOXC8-201ENST00000040584 SMARCD1Q96GM5 515 aa23.12■■□□□ 1.29
HOXC8-201ENST00000040584 TTC7AQ9ULT0 858 aaPredicted RBP23.12■■□□□ 1.29
HOXC8-201ENST00000040584 OR6C75A6NL08 312 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 CAPN15O75808 1086 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 LINC00271P0C7V0 271 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 ARPP19P56211 112 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 PPP1R15BQ5SWA1 713 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 C9orf50Q5SZB4 431 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 OR6B2Q6IFH4 312 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 FAM183BPQ6ZVS7 135 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 SPATA2LQ8IUW3 424 aaPredicted RBP23.11■■□□□ 1.29
HOXC8-201ENST00000040584 SCUBE3Q8IX30 993 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 ZMIZ2Q8NF64 920 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 FEZF2Q8TBJ5 459 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 WDR35Q9P2L0 1181 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 AMFRQ9UKV5 643 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 PACSIN2Q9UNF0 486 aaPredicted RBP23.11■■□□□ 1.29
HOXC8-201ENST00000040584 NR2E3Q9Y5X4 410 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 ALG6Q9Y672 507 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 LCHNA4D1U4 455 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 H7C4K7 107 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 CEP104O60308 925 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 TBC1D4O60343 1298 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 LCP1P13796 627 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 MAGEA10P43363 369 aaPredicted RBP23.11■■□□□ 1.29
HOXC8-201ENST00000040584 RPL34P49207 117 aaKnown RBP23.11■■□□□ 1.29
HOXC8-201ENST00000040584 CARSP49589 748 aaKnown RBP23.11■■□□□ 1.29
HOXC8-201ENST00000040584 RASIP1Q5U651 963 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 C4orf50Q6ZRC1 276 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 CCDC26Q8TAB7 109 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 IFT81Q8WYA0 676 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 MCRS1Q96EZ8 462 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 HSFY1Q96LI6 401 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 MCEEQ96PE7 176 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 MIS12Q9H081 205 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 SLITRK6Q9H5Y7 841 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 AAASQ9NRG9 546 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 CHST7Q9NS84 486 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 NFU1Q9UMS0 254 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 PCDHB12Q9Y5F1 795 aa23.11■■□□□ 1.29
HOXC8-201ENST00000040584 C2CD2LO14523 706 aa23.1■■□□□ 1.29
HOXC8-201ENST00000040584 SOD2P04179 222 aa23.1■■□□□ 1.29
HOXC8-201ENST00000040584 KIAA1841Q6NSI8 718 aa23.1■■□□□ 1.29
HOXC8-201ENST00000040584 DCUN1D2Q6PH85 259 aa23.1■■□□□ 1.29
HOXC8-201ENST00000040584 PIWIL1Q96J94 861 aaKnown RBP23.1■■□□□ 1.29
HOXC8-201ENST00000040584 PGLYRP2Q96PD5 576 aa23.1■■□□□ 1.29
HOXC8-201ENST00000040584 ABI2Q9NYB9 513 aaPredicted RBP23.1■■□□□ 1.29
HOXC8-201ENST00000040584 KIAA1671Q9BY89 1806 aa23.1■■□□□ 1.29
HOXC8-201ENST00000040584 TMEM191CA6NGB0 347 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 MYO1FO00160 1098 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 PAPSS1O43252 624 aaPredicted RBP23.09■■□□□ 1.29
HOXC8-201ENST00000040584 KRT3P12035 628 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CYP2F1P24903 491 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 SKOR1P84550 965 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 MAATS1Q7Z4T9 603 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CPNE8Q86YQ8 564 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 TSEN2Q8NCE0 465 aaKnown RBP23.09■■□□□ 1.29
HOXC8-201ENST00000040584 SP7Q8TDD2 431 aaPredicted RBP23.09■■□□□ 1.29
HOXC8-201ENST00000040584 HES6Q96HZ4 224 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 NAP1L3Q99457 506 aaPredicted RBP23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CAPS2Q9BXY5 557 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CSNK1G1Q9HCP0 422 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 METTL5Q9NRN9 209 aaKnown RBP23.09■■□□□ 1.29
HOXC8-201ENST00000040584 NLRC5Q86WI3 1866 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CARNS1A5YM72 827 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 SIGLEC16A6NMB1 481 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 RAD51CO43502 376 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 ACADSBP45954 432 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 SNX16P57768 344 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 TAP1Q03518 808 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 FAM102AQ5T9C2 384 aaPredicted RBP23.09■■□□□ 1.29
HOXC8-201ENST00000040584 EMC10Q5UCC4 262 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 DDX53Q86TM3 631 aaKnown RBP23.09■■□□□ 1.29
HOXC8-201ENST00000040584 JOSD2Q8TAC2 188 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CASKIN2Q8WXE0 1202 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CLP1Q92989 425 aaKnown RBP23.09■■□□□ 1.29
HOXC8-201ENST00000040584 LRRC45Q96CN5 670 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 HINFPQ9BQA5 517 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CYLDQ9NQC7 956 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CDY1Q9Y6F8 540 aa23.09■■□□□ 1.29
HOXC8-201ENST00000040584 CPB1P15086 417 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 RPL17P18621 184 aaKnown RBP23.08■■□□□ 1.29
HOXC8-201ENST00000040584 COMTP21964 271 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 RFC1P35251 1148 aaPredicted RBP23.08■■□□□ 1.29
HOXC8-201ENST00000040584 PPM1AP35813 382 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 DNA2P51530 1060 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 ADIGQ0VDE8 80 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 PSMD5Q16401 504 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 NFE2Q16621 373 aaPredicted RBP23.08■■□□□ 1.29
HOXC8-201ENST00000040584 OLFML1Q6UWY5 402 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 LRIG3Q6UXM1 1119 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 TNS4Q8IZW8 715 aa23.08■■□□□ 1.29
HOXC8-201ENST00000040584 CLEC4CQ8WTT0 213 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms