RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Tada2aQ8CHV6 443 aa9.68□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Zbtb44Q8R0A2 453 aa9.68□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Katnal2Q9D3R6 539 aa9.68□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Slxl1Q9D515 155 aa9.68□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Msh5Q9QUM7 833 aa9.68□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Tspan3Q9QY33 253 aa9.68□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Usp21Q9QZL6 566 aa9.68□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Fbxl16A2RT62 479 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Apba3O88888 571 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Irf8P23611 424 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 TfamP40630 243 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Mrgprb8Q7TN51 330 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Tmc3Q7TQ69 1130 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Slc9b1Q8C0X2 565 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 CherpQ8CGZ0 936 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Iqsec1Q8R0S2 961 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ppp6r2Q8R3Q2 923 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Sh3kbp1Q8R550 709 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 PawrQ925B0 333 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ggt7Q99JP7 662 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Srpk1O70551 648 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 UmpsP13439 481 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Akt1P31750 480 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 DgkqQ6P5E8 934 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Plekha8Q80W71 519 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Tmem39bQ810L4 492 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Fbxo28Q8BIG4 368 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 H2afy2Q8CCK0 372 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Abcf3Q8K268 709 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Tmem82Q8R115 356 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Wdr98Q8VC42 657 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 FopnlQ9CZS3 174 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Oma1Q9D8H7 521 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Gm13941A2AJ38 245 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Fam172aQ3TNH5 417 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Fam198aQ3UY90 562 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Tmem247Q497K7 211 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 9930111J21Rik1Q5SVP0 844 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Prdm4Q80V63 803 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Srrm3Q80WV7 648 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Dlg1Q811D0 905 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Scn3bQ8BHK2 215 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Fam180aQ8BR21 173 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Senp7Q8BUH8 1037 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Haus8Q99L00 373 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Hormad1Q9D5T7 392 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Serpinb9bQ9DAV6 377 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Gm21083A0A0G2JFD5 256 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Vmn2r77L7N2B7 854 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Nr3c1P06537 783 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Akr1c6P70694 323 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Cab39Q06138 341 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ddx5Q61656 614 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 RetsatQ64FW2 609 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Cpne3Q8BT60 533 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Swi5Q8K3D3 89 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Mrpl1Q99N96 336 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Q9CYI0 393 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Zfp655Q9CZP3 541 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 MceeQ9D1I5 178 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Serpina1fQ9DCQ7 411 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Pi16Q9ET66 489 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Ror1Q9Z139 937 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Arih1Q9Z1K5 555 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Dip2cE9PWR4 1557 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 RereQ80TZ9 1558 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 4921501E09RikA0A0R4J054 908 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Lilra5D3Z7A9 295 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Vmn2r5K7N788 911 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Tnfrsf11bO08712 401 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 PolP11369 1281 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Sstr1P30873 391 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Nedd1P33215 660 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Klra6Q60653 266 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Antxr2Q6DFX2 487 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Phf21aQ6ZPK0 659 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Cox18Q8VC74 331 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Tecpr2Q3UH45 1423 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Olfr271-ps1A0A1L1SQH2 283 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Olfr611K7N609 323 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Olfr612L7N462 323 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Folh1O35409 752 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 MafgO54790 162 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Orm2P07361 207 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Sdr16c6Q05A13 316 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 D630036H23RikQ3UQD6 204 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Nt5c2Q3V1L4 560 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Gcnt3Q5JCT0 437 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 FdxrQ61578 494 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 FAM120AQ6A0A9 1112 aaKnown RBP9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Raver2Q7TPD6 673 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Sp8Q8BMJ8 486 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Rxfp2Q91ZZ5 737 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Poc5Q9DBS8 558 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 MaddQ80U28 1577 aa9.67□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Kiaa1210E9Q0C6 1637 aa9.66□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Mup10A2BIN1 180 aa9.66□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Mup14A2CEK7 180 aa9.66□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Mup19A9C497 187 aa9.66□□□□□ -0.86
Prpf40a-201ENSMUST00000076313 Mup15A9R9W0 180 aa9.66□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms