RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Pcdhb3Q91XZ7 784 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 TfQ921I1 697 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 St6galnac4Q9R2B6 360 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Tmem131O70472 1877 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gm6583E9Q8Z1 469 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Unc5cO08747 931 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Abcb1bP06795 1276 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 IppP28575 584 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Prdx5P99029 210 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Cdk16Q04735 496 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ankmy2Q3TPE9 440 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Foxn1Q61575 648 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Aldh1a2Q62148 518 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ahcyl2Q68FL4 613 aaKnown RBP13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Cacna2d2Q6PHS9 1154 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Got1l1Q7TSV6 404 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ankzf1Q80UU1 748 aaKnown RBP13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ubap2lQ80X50 1107 aaKnown RBP13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 CenpuQ8C4M7 410 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 AA792892Q8C6S1 278 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 PlvapQ91VC4 438 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Usp11Q99K46 921 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 CoprsQ9CQ13 173 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Rnaseh2aQ9CWY8 301 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Arhgap8Q9CXP4 425 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Snx29Q9D3S3 818 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Mrps9Q9D7N3 390 aaKnown RBP13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Scyl1Q9EQC5 806 aaKnown RBP13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Bace2Q9JL18 514 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Trpv2Q9WTR1 756 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Krt27Q9Z320 448 aa13.24□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gm11985A0A1B0GS61 206 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Soat2O88908 525 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Btg3P50615 252 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Fam172aQ3TNH5 417 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Zfp658Q5PPQ4 887 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Orc2Q60862 576 aaKnown RBP13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 GapdhsQ64467 440 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Wscd1Q80XH4 572 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Rbm12b1Q80YR9 836 aaKnown RBP13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Q810S2 196 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Aste1Q8BIR2 672 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Lrrc8cQ8R502 803 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 NelfcdQ922L6 591 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Rnf112Q96DY5 654 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Magel2Q9QZ04 1284 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gm3424L7N298 263 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gm8246M0QWX9 263 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Slc16a10Q3U9N9 512 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Prkaa1Q5EG47 559 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gigyf2Q6Y7W8 1291 aaKnown RBP13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Klhl29Q80T74 875 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Pi4kbQ8BKC8 816 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Fam151aQ8QZW3 608 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Tmco4Q91WU4 631 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ogfod2Q9CQ04 349 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Acbd6Q9D061 282 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Mms19Q9D071 1031 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Tubgcp4Q9D4F8 667 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ubxn11Q9D572 484 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Tm9sf1Q9DBU0 606 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Pdcd7Q9WTY1 482 aa13.23□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Zfp612A0A1D5RMC2 672 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Dnase1l3O55070 310 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Il3P01586 166 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Myl2P51667 166 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 YwhazP63101 245 aaKnown RBP13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gbp1Q01514 589 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Asprv1Q09PK2 339 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 ZbbxQ0P5X5 716 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Eif4bQ8BGD9 611 aaKnown RBP13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Frmd4aQ8BIE6 1020 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Anapc5Q8BTZ4 740 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Lrrc19Q8BZT5 364 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Wdr27Q8C5V5 780 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Dlk2Q8K1E3 382 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Csde1Q91W50 798 aaKnown RBP13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 MceeQ9D1I5 178 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Tspan17Q9D7W4 270 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Tekt1Q9DAJ2 418 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 PolkQ9QUG2 852 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gm29554A0A087WNW4 188 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ankfn1A0A140LIW7 1083 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gm4302E9PX25 294 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Olfr731F8VQB9 326 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Gm8909G3UXE9 396 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Srpk1O70551 648 aaKnown RBP13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 SftpbP50405 377 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Msx3P70354 204 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Nfe2Q07279 373 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 CybbQ61093 570 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 WlsQ6DID7 541 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Cand1Q6ZQ38 1230 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Ace2Q8R0I0 805 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Rpa1Q8VEE4 623 aaKnown RBP13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Fam49bQ921M7 324 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Tmco5aQ9D9D5 303 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Mindy4b-psA0A1W2P7H6 457 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Pdzrn4E9PUZ9 1014 aa13.22□□□□□ -0.29
Rnf4-201ENSMUST00000030992 Art2bO35975 289 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 45.5 ms