RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Orc2Q60862 576 aaKnown RBP14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Arhgap28Q8BN58 729 aa14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mov10l1Q99MV5 1187 aa14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nfx1B1AY10 1114 aaKnown RBP14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pex5O09012 639 aa14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 CcnoP0C242 352 aa14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tgm2P21981 686 aaKnown RBP14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ppp2r1bQ7TNP2 601 aaKnown RBP14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mettl21eQ8CDZ2 244 aa14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Amhr2Q8K592 568 aa14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ankef1Q9D2J7 775 aa14.39□□□□□ -0.11
Col5a1-201ENSMUST00000028280 A930018M24RikB7ZMY3 218 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Rbm44Q3V089 1013 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 4932414N04RikQ8CEQ9 752 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Glra3Q91XP5 464 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Dnaja4Q9JMC3 397 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Magi3Q9EQJ9 1476 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm5072A2AHM1 344 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 C2cd2E9Q3C1 696 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm4312K9J7E2 289 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Esyt3Q5DTI8 891 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Itga7Q61738 1179 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Stk32aQ8BGW6 398 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Usp38Q8BW70 1042 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 PdxkQ8K183 312 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Klrb1fQ8VD98 217 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 PyglQ9ET01 850 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm8906L7N2A2 181 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Krt86P97861 486 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 SucoQ8C341 1250 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Olfr295Q7TS08 309 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ints2Q80UK8 1198 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Slc9a7Q8BLV3 726 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Dnajc9Q91WN1 259 aaKnown RBP14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 MtpapQ9D0D3 585 aaKnown RBP14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Kiaa1551Q5DTW7 1521 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm13941A2AJ38 245 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ccng2O08918 344 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nfkb1P25799 971 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pkn1P70268 946 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Lrrc8bQ5DU41 803 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Itih2Q61703 946 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Mapk4Q6P5G0 583 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Them6Q80ZW2 207 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pak5Q8C015 719 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Smtnl2Q8CI12 456 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pcdha10Q91Y20 946 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 NlnQ91YP2 704 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Far1Q922J9 515 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nipsnap3bQ9CQE1 247 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nudt14Q9D142 222 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Tmed11Q9D2R4 215 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Slc12a4Q9JIS8 1085 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cdk4P30285 303 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 OsbpQ3B7Z2 805 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Gm4952Q5FW57 296 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Zfp398Q8BV16 643 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Stap2Q8R0L1 411 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pdk3Q922H2 415 aaKnown RBP14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 MmadhcQ99LS1 296 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ndufb9Q9CQJ8 179 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Efhd2Q9D8Y0 240 aaKnown RBP14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ap4b1Q9WV76 738 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pcdh11xF6ZNL5 1338 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Scgb2b21A0A087WQA9 112 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 EpoP07321 192 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 CtifQ6PEE2 600 aaKnown RBP14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Clca2Q8BG22 942 aa14.38□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nid2O88322 1403 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Foxn3Q499D0 457 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Cd180Q62192 661 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Myo1hQ9D6A1 958 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Pik3cgQ9JHG7 1102 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Grin2dQ03391 1323 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Zbed6D2EAC2 980 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nr0b1Q61066 472 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 ZfatQ7TS63 1237 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Kansl2Q8BQR4 486 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Lrrc49Q91YK0 686 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Far2Q7TNT2 515 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Dppa3Q8QZY3 150 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Kbtbd4Q8R179 534 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nup85Q8R480 656 aaKnown RBP14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ndfip2Q91ZP6 311 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Kctd14A0A0U1RNG7 287 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Sar1aP36536 198 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 ZbbxQ0P5X5 716 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Casc4Q6P2L7 435 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Maml1Q6T264 1020 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Ckap4Q8BMK4 575 aaKnown RBP14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 EngaseQ8BX80 734 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Emc3Q99KI3 261 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Scp2P32020 547 aaKnown RBP14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Stx4P70452 298 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Upf3aQ3ULJ3 422 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Rfx4Q7TNK1 735 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Nsun6Q7TS68 476 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Kcnf1Q7TSH7 493 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 Slc20a2Q80UP8 656 aa14.37□□□□□ -0.11
Col5a1-201ENSMUST00000028280 TcimQ9D915 106 aa14.37□□□□□ -0.11
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms