RNA–Protein interactions for RNA: ENSMUST00000013771.14

Trim54-201, Transcript of Tripartite motif-containing protein 54, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Trim54, Length 1,434 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54-201ENSMUST00000013771 Ccdc43Q9CR29 222 aaKnown RBP17.87■□□□□ 0.45
Trim54-201ENSMUST00000013771 Serpinb12Q9D7P9 423 aa17.87■□□□□ 0.45
Trim54-201ENSMUST00000013771 Rnf138rt1Q9D9M9 248 aa17.87■□□□□ 0.45
Trim54-201ENSMUST00000013771 R3hdmlA2A5I3 253 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gm13089A2AGW7 455 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ddx23D3Z0M9 819 aaKnown RBP17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cyp2t4E9PWV0 503 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Spata31E9QAF0 1014 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gm2897K7N6T7 172 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Vmn2r15L7N2A0 855 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Pde8aO88502 823 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 IvlP48997 467 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Slc11a2P49282 568 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Csrp2P97314 193 aaKnown RBP17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Adamts1P97857 968 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gsdmc2Q2KHK6 480 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gsdmc4Q3TR54 480 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cldn11Q60771 207 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Arnt2Q61324 712 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Znf12Q7TSI0 686 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Lrrc8aQ80WG5 810 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Anks1bQ8BIZ1 1259 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gsdmc3Q8CB12 480 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Dync1li1Q8R1Q8 523 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Kif17Q99PW8 1038 aa17.86■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gm4846B2RWH8 538 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cdh18E9Q9Q6 790 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Tp53P02340 387 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Nfkb1P25799 971 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ctnnd1P30999 938 aaKnown RBP17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Polr3bP59470 1133 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Kcnb1Q03717 857 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Frmd8Q3UFK8 466 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ccdc57Q6PHN1 1016 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Wdr3Q8BHB4 942 aaKnown RBP17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Chtf18Q8BIW9 969 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 AsphQ8BSY0 741 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 SucoQ8C341 1250 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ccdc187Q8C5V8 958 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Zdhhc3Q8R173 299 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Eps8l1Q8R5F8 716 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Fam3cQ91VU0 227 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ccdc94Q9D6J3 314 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Scamp5Q9JKD3 235 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Nme7Q9QXL8 395 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Slc2a5Q9WV38 501 aa17.85■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cyp4a12bA2A974 508 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ttc38A3KMP2 465 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ccdc149F6V035 524 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Man2b1O09159 1013 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Prf1P10820 554 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 GcP21614 476 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cyp11b1Q3TG86 501 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Upf3bQ3ULL6 472 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Bfsp2Q6NVD9 416 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ano6Q6P9J9 911 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Stk40Q7TNL3 435 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cdh7Q8BM92 785 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Dhcr24Q8VCH6 516 aaKnown RBP17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Impa2Q91UZ5 290 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cyp4a12aQ91WL5 508 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Fam49bQ921M7 324 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Tor1aip1Q921T2 595 aaKnown RBP17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 NamptQ99KQ4 491 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Scyl3Q9DBQ7 735 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Rasgrp1Q9Z1S3 795 aa17.84■□□□□ 0.45
Trim54-201ENSMUST00000013771 Il17dA0A0B4J1G4 205 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gm45208A0A140LJ36 292 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Tmem235B1AQL3 211 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 D3Z070 196 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Top6blJ3QMY9 579 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gm8298J3QPI0 401 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 P01650 108 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 P01653 108 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cdkn1cP49919 348 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 CebpzP53569 1052 aaKnown RBP17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cntn5P68500 1098 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Pstpip1P97814 415 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Kcnd1Q03719 651 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Ebf1Q07802 591 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Zfyve27Q3TXX3 415 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Gpr174Q3U507 335 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Zfp251Q6PCX8 632 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Csnk1g1Q8BTH8 459 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Slc7a14Q8BXR1 771 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Sit1Q8C503 180 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Papd4Q91YI6 484 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Sec13Q9D1M0 322 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Cfap45Q9D9U9 551 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Uchl5Q9WUP7 329 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 DexiQ9WUQ7 95 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Stau1Q9Z108 487 aaKnown RBP17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Plxnd1Q3UH93 1925 aa17.83■□□□□ 0.45
Trim54-201ENSMUST00000013771 Igkv5-45A0A0B4J1J1 115 aa17.82■□□□□ 0.44
Trim54-201ENSMUST00000013771 Gm45140A0A0N4SUM8 220 aa17.82■□□□□ 0.44
Trim54-201ENSMUST00000013771 Gm12394A2AKP6 982 aa17.82■□□□□ 0.44
Trim54-201ENSMUST00000013771 Nub1P54729 614 aa17.82■□□□□ 0.44
Trim54-201ENSMUST00000013771 Htr4P97288 388 aa17.82■□□□□ 0.44
Trim54-201ENSMUST00000013771 rp9P97762 213 aa17.82■□□□□ 0.44
Trim54-201ENSMUST00000013771 IhhP97812 411 aa17.82■□□□□ 0.44
Retrieved 100 of 22,080 RNA–protein pairs in 20.3 ms