RNA–Protein interactions for RNA: YOR124C

UBP2, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP2, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP2YOR124C COX14P39103 70 aa1.54□□□□□ -2.16
UBP2YOR124C HUA1P40325 198 aa1.54□□□□□ -2.16
UBP2YOR124C YMR181CQ03231 154 aa1.54□□□□□ -2.16
UBP2YOR124C SFT1P43682 97 aa1.54□□□□□ -2.16
UBP2YOR124C PRM7Q12459 698 aa1.54□□□□□ -2.16
UBP2YOR124C YGR035W-AQ45U48 73 aa1.54□□□□□ -2.16
UBP2YOR124C RPL36BO14455 100 aaKnown RBP1.54□□□□□ -2.16
UBP2YOR124C RPL36AP05745 100 aaPredicted RBP1.54□□□□□ -2.16
UBP2YOR124C RPS23AP0CX29 145 aaKnown RBP1.54□□□□□ -2.16
UBP2YOR124C RPS23BP0CX30 145 aa1.54□□□□□ -2.16
UBP2YOR124C ATP15P21306 62 aa1.54□□□□□ -2.16
UBP2YOR124C PIR5P46999 287 aa1.54□□□□□ -2.16
UBP2YOR124C IRC21Q04772 201 aa1.54□□□□□ -2.16
UBP2YOR124C YKL065W-AQ2V2P2 73 aa1.54□□□□□ -2.16
UBP2YOR124C DSE2P38844 325 aa1.53□□□□□ -2.16
UBP2YOR124C POR2P40478 281 aa1.53□□□□□ -2.16
UBP2YOR124C MMS2P53152 137 aa1.53□□□□□ -2.16
UBP2YOR124C YDL241WQ07738 123 aa1.53□□□□□ -2.16
UBP2YOR124C EMC6Q12431 108 aa1.53□□□□□ -2.16
UBP2YOR124C HUR1P45820 110 aa1.53□□□□□ -2.16
UBP2YOR124C ATP23P53722 227 aa1.53□□□□□ -2.16
UBP2YOR124C SPO24Q3E752 67 aa1.53□□□□□ -2.16
UBP2YOR124C RPL11AP0C0W9 174 aaKnown RBP1.53□□□□□ -2.17
UBP2YOR124C SPT4P32914 102 aaPredicted RBP1.53□□□□□ -2.17
UBP2YOR124C YNL190WP53872 204 aa1.53□□□□□ -2.17
UBP2YOR124C RPL11BQ3E757 174 aaPredicted RBP1.53□□□□□ -2.17
UBP2YOR124C YNL234WP53857 426 aa1.52□□□□□ -2.17
UBP2YOR124C RPL15BP54780 204 aaPredicted RBP1.52□□□□□ -2.17
UBP2YOR124C ATP18P81450 59 aa1.52□□□□□ -2.17
UBP2YOR124C ICY1Q04329 127 aa1.52□□□□□ -2.17
UBP2YOR124C YFR009W-AP0C5M9 85 aa1.52□□□□□ -2.17
UBP2YOR124C YRA2P36036 203 aaKnown RBP RIP-Chip data1.52□□□□□ -2.17not detected
UBP2YOR124C UTH1P36135 365 aa1.52□□□□□ -2.17
UBP2YOR124C YEL008WP40001 126 aa1.52□□□□□ -2.17
UBP2YOR124C ERI1P62651 68 aaKnown RBP1.52□□□□□ -2.17
UBP2YOR124C CRC1Q12289 327 aa1.52□□□□□ -2.17
UBP2YOR124C ATP20Q12233 115 aa1.52□□□□□ -2.17
UBP2YOR124C BEM2P39960 2167 aaKnown RBP1.52□□□□□ -2.17
UBP2YOR124C YLR156WP0CE96 114 aa1.51□□□□□ -2.17
UBP2YOR124C YLR159WP0CE97 114 aa1.51□□□□□ -2.17
UBP2YOR124C YLR161WP0CE98 114 aa1.51□□□□□ -2.17
UBP2YOR124C RPB9P27999 122 aa1.51□□□□□ -2.17
UBP2YOR124C HOT13P36078 116 aa1.51□□□□□ -2.17
UBP2YOR124C YGL193CP53097 103 aa1.51□□□□□ -2.17
UBP2YOR124C YLR281CQ05863 155 aa1.51□□□□□ -2.17
UBP2YOR124C YER175W-AQ8TGU4 54 aa1.51□□□□□ -2.17
UBP2YOR124C KRE9P39005 276 aa1.51□□□□□ -2.17
UBP2YOR124C TOS8P53147 276 aa1.51□□□□□ -2.17
UBP2YOR124C YKL183C-AQ3E765 70 aa1.51□□□□□ -2.17
UBP2YOR124C YLR307C-AQ3E825 87 aa1.51□□□□□ -2.17
UBP2YOR124C AIM4P38305 123 aaPredicted RBP1.51□□□□□ -2.17
UBP2YOR124C YMR244WQ04018 355 aa1.51□□□□□ -2.17
UBP2YOR124C YLR042CQ07990 161 aa1.51□□□□□ -2.17
UBP2YOR124C VPS13Q07878 3144 aa1.51□□□□□ -2.17
UBP2YOR124C YJR107C-AP0CT86 78 aa1.5□□□□□ -2.17
UBP2YOR124C YBR219CP38317 127 aa1.5□□□□□ -2.17
UBP2YOR124C PBA1Q05778 276 aa1.5□□□□□ -2.17
UBP2YOR124C YPR013CQ12145 317 aa1.5□□□□□ -2.17
UBP2YOR124C YBR144CP34215 104 aa1.5□□□□□ -2.17
UBP2YOR124C SMD1Q02260 146 aaPredicted RBP1.5□□□□□ -2.17
UBP2YOR124C YDR114CQ04597 100 aa1.5□□□□□ -2.17
UBP2YOR124C TMC1Q08422 150 aaPredicted RBP1.5□□□□□ -2.17
UBP2YOR124C BET1P22804 142 aa1.5□□□□□ -2.17
UBP2YOR124C COX23P38824 151 aa1.5□□□□□ -2.17
UBP2YOR124C YFR035CP43608 114 aa1.5□□□□□ -2.17
UBP2YOR124C NRM1P53718 249 aa1.5□□□□□ -2.17
UBP2YOR124C YMR295CQ03559 197 aa1.5□□□□□ -2.17
UBP2YOR124C YEL045CP32616 141 aa1.49□□□□□ -2.17
UBP2YOR124C MRPL38P35996 138 aaPredicted RBP1.49□□□□□ -2.17
UBP2YOR124C WWM1P43582 211 aaKnown RBP1.49□□□□□ -2.17
UBP2YOR124C BLM10P43583 2143 aa1.49□□□□□ -2.17
UBP2YOR124C YGR025WP53216 100 aa1.49□□□□□ -2.17
UBP2YOR124C MRPS8Q03799 155 aa1.49□□□□□ -2.17
UBP2YOR124C ICS3P47034 131 aa1.49□□□□□ -2.17
UBP2YOR124C YDR274CP87283 123 aa1.49□□□□□ -2.17
UBP2YOR124C YNL162W-AQ3E7A8 72 aa1.49□□□□□ -2.17
UBP2YOR124C YLL006W-AQ3E814 58 aa1.49□□□□□ -2.17
UBP2YOR124C NOP10Q6Q547 58 aaPredicted RBP1.49□□□□□ -2.17
UBP2YOR124C RPL39P04650 51 aa1.48□□□□□ -2.17
UBP2YOR124C VAM10Q08474 114 aa1.48□□□□□ -2.17
UBP2YOR124C HOR7Q05827 59 aa1.48□□□□□ -2.17
UBP2YOR124C YLR285C-AQ3E771 56 aa1.48□□□□□ -2.17
UBP2YOR124C YDR034W-BQ6Q5X2 51 aa1.48□□□□□ -2.17
UBP2YOR124C EDC1P53080 175 aaPredicted RBP1.48□□□□□ -2.17
UBP2YOR124C RSM18P40033 138 aa1.47□□□□□ -2.17
UBP2YOR124C YGL034CP53186 121 aa1.47□□□□□ -2.17
UBP2YOR124C MPC3P53311 146 aa1.47□□□□□ -2.17
UBP2YOR124C YBR182C-AQ8TGU6 64 aa1.47□□□□□ -2.17
UBP2YOR124C YER188C-AP0C0V2 99 aa1.47□□□□□ -2.17
UBP2YOR124C MIC10Q96VH5 97 aa1.47□□□□□ -2.17
UBP2YOR124C YFL019CP43576 117 aa1.47□□□□□ -2.17
UBP2YOR124C YMR122W-AQ3E842 84 aa1.47□□□□□ -2.17
UBP2YOR124C YOL085CQ99345 113 aa1.47□□□□□ -2.17
UBP2YOR124C BRR2P32639 2163 aaKnown RBP1.46□□□□□ -2.18
UBP2YOR124C YJL197C-AP0C5P0 93 aa1.46□□□□□ -2.18
UBP2YOR124C RPS11AP0CX47 156 aaKnown RBP1.46□□□□□ -2.18
UBP2YOR124C RPS11BP0CX48 156 aaKnown RBP1.46□□□□□ -2.18
UBP2YOR124C YCR001WP25347 104 aa1.46□□□□□ -2.18
UBP2YOR124C SPG1P50088 95 aa1.46□□□□□ -2.18
UBP2YOR124C YOL014WQ08110 124 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms