RNA–Protein interactions for RNA: YOL013C

HRD1, Transcript of Ubiquitin-protein ligase, yeastyeast

Gene HRD1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HRD1YOL013C RPL33AP05744 107 aaKnown RBP1.9□□□□□ -2.1
HRD1YOL013C HMRA1P0CY11 126 aa1.9□□□□□ -2.1
HRD1YOL013C RPL13BP40212 199 aaKnown RBP1.9□□□□□ -2.1
HRD1YOL013C VMA21P41806 77 aa1.9□□□□□ -2.1
HRD1YOL013C CDC39P25655 2108 aaKnown RBP1.9□□□□□ -2.11
HRD1YOL013C MSL1P40567 111 aaPredicted RBP1.9□□□□□ -2.11
HRD1YOL013C YMR122CQ03879 124 aa1.9□□□□□ -2.11
HRD1YOL013C HPA2Q06592 156 aa1.9□□□□□ -2.11
HRD1YOL013C SLH1P53327 1967 aaKnown RBP1.89□□□□□ -2.11
HRD1YOL013C POR2P40478 281 aa1.89□□□□□ -2.11
HRD1YOL013C CYR1P08678 2026 aaKnown RBP1.88□□□□□ -2.11
HRD1YOL013C YLR285C-AQ3E771 56 aa1.87□□□□□ -2.11
HRD1YOL013C HMRA2P0CY13 119 aa1.86□□□□□ -2.11
HRD1YOL013C YFL065CP43539 102 aa1.86□□□□□ -2.11
HRD1YOL013C COA4Q05809 96 aa1.86□□□□□ -2.11
HRD1YOL013C TRA1P38811 3744 aa1.86□□□□□ -2.11
HRD1YOL013C PFY1P07274 126 aa1.86□□□□□ -2.11
HRD1YOL013C PAU5P43575 122 aa1.86□□□□□ -2.11
HRD1YOL013C IRA1P18963 3092 aa1.85□□□□□ -2.11
HRD1YOL013C YHR138CP38841 114 aaPredicted RBP1.85□□□□□ -2.11
HRD1YOL013C YIL163CP40448 117 aa1.85□□□□□ -2.11
HRD1YOL013C YDR042CQ03205 200 aa1.85□□□□□ -2.11
HRD1YOL013C YOL131WQ08270 108 aa1.85□□□□□ -2.11
HRD1YOL013C ECM12O13529 151 aa1.84□□□□□ -2.11
HRD1YOL013C YSF3P0C074 85 aaPredicted RBP1.84□□□□□ -2.11
HRD1YOL013C CYB5P40312 120 aa1.84□□□□□ -2.11
HRD1YOL013C TAO3P40468 2376 aa1.84□□□□□ -2.12
HRD1YOL013C CSF1Q12150 2958 aa1.84□□□□□ -2.12
HRD1YOL013C YPR203WQ08994 102 aa1.83□□□□□ -2.12
HRD1YOL013C IRA2P19158 3079 aa1.83□□□□□ -2.12
HRD1YOL013C YPR117WQ06116 2489 aa1.83□□□□□ -2.12
HRD1YOL013C RPS22AP0C0W1 130 aaKnown RBP1.82□□□□□ -2.12
HRD1YOL013C AQY2P0CD90 149 aa1.82□□□□□ -2.12
HRD1YOL013C YHL037CP38733 133 aa1.82□□□□□ -2.12
HRD1YOL013C YHL005CP38752 130 aa1.82□□□□□ -2.12
HRD1YOL013C CCW12Q12127 133 aa1.82□□□□□ -2.12
HRD1YOL013C YLR363W-AQ3E747 85 aa1.82□□□□□ -2.12
HRD1YOL013C BRR2P32639 2163 aaKnown RBP1.82□□□□□ -2.12
HRD1YOL013C BEM2P39960 2167 aaKnown RBP1.82□□□□□ -2.12
HRD1YOL013C YHR212W-AP0CX91 67 aa1.81□□□□□ -2.12
HRD1YOL013C ROX3P25046 220 aa1.81□□□□□ -2.12
HRD1YOL013C GCV3P39726 170 aaPredicted RBP1.81□□□□□ -2.12
HRD1YOL013C YMR175W-AQ3E766 64 aa1.8□□□□□ -2.12
HRD1YOL013C MHF2Q3E829 80 aa1.8□□□□□ -2.12
HRD1YOL013C IMP2P46972 177 aa1.8□□□□□ -2.12
HRD1YOL013C MRPS12P53732 153 aa1.8□□□□□ -2.12
HRD1YOL013C ICY1Q04329 127 aa1.8□□□□□ -2.12
HRD1YOL013C LSM6Q06406 86 aaKnown RBP1.8□□□□□ -2.12
HRD1YOL013C CWP2P43497 92 aa1.79□□□□□ -2.12
HRD1YOL013C SUS1Q6WNK7 96 aa1.79□□□□□ -2.12
HRD1YOL013C POL2P21951 2222 aaKnown RBP1.79□□□□□ -2.12
HRD1YOL013C ACC1Q00955 2233 aaKnown RBP1.78□□□□□ -2.12
HRD1YOL013C SRB6P32570 121 aa1.78□□□□□ -2.12
HRD1YOL013C RPS27AP35997 82 aaKnown RBP1.78□□□□□ -2.12
HRD1YOL013C RPS27BP38711 82 aa1.78□□□□□ -2.12
HRD1YOL013C RSM18P40033 138 aa1.78□□□□□ -2.12
HRD1YOL013C VPS55P47111 140 aa1.78□□□□□ -2.12
HRD1YOL013C POC4Q12245 148 aaPredicted RBP1.78□□□□□ -2.12
HRD1YOL013C FMP27Q06179 2628 aa1.78□□□□□ -2.12
HRD1YOL013C YCR095W-AQ3E787 52 aa1.77□□□□□ -2.13
HRD1YOL013C ENV10Q99382 181 aa1.77□□□□□ -2.13
HRD1YOL013C YBR056W-AI2HB52 66 aa1.77□□□□□ -2.13
HRD1YOL013C YDR210WQ03482 75 aa1.77□□□□□ -2.13
HRD1YOL013C RPS22BQ3E7Y3 130 aaKnown RBP1.77□□□□□ -2.13
HRD1YOL013C YIL046W-AQ3E7Z4 54 aa1.77□□□□□ -2.13
HRD1YOL013C MRPL38P35996 138 aaPredicted RBP1.76□□□□□ -2.13
HRD1YOL013C YBR013CP38215 129 aa1.76□□□□□ -2.13
HRD1YOL013C MIC27P50945 234 aa1.76□□□□□ -2.13
HRD1YOL013C YNL122CP53921 115 aaPredicted RBP1.76□□□□□ -2.13
HRD1YOL013C LCL2Q08045 131 aa1.76□□□□□ -2.13
HRD1YOL013C SEC16P48415 2195 aaKnown RBP1.76□□□□□ -2.13
HRD1YOL013C CCW14O13547 238 aa1.75□□□□□ -2.13
HRD1YOL013C YIL086CP40503 102 aa1.75□□□□□ -2.13
HRD1YOL013C YCL048W-AQ2V2Q2 79 aa1.75□□□□□ -2.13
HRD1YOL013C PAU6P0CE90 120 aa1.74□□□□□ -2.13
HRD1YOL013C PAU18P0CE91 120 aa1.74□□□□□ -2.13
HRD1YOL013C TIM12P32830 109 aa1.74□□□□□ -2.13
HRD1YOL013C ICS3P47034 131 aa1.74□□□□□ -2.13
HRD1YOL013C IRC21Q04772 201 aa1.74□□□□□ -2.13
HRD1YOL013C YOL118CQ08259 102 aa1.74□□□□□ -2.13
HRD1YOL013C HFA1P32874 2273 aa1.74□□□□□ -2.13
HRD1YOL013C YCR085WP25650 117 aa1.74□□□□□ -2.13
HRD1YOL013C SPC1P46965 94 aa1.74□□□□□ -2.13
HRD1YOL013C YLR255CO13574 117 aa1.73□□□□□ -2.13
HRD1YOL013C RPA12P32529 125 aaKnown RBP1.73□□□□□ -2.13
HRD1YOL013C NCE101Q02820 53 aa1.73□□□□□ -2.13
HRD1YOL013C BLM10P43583 2143 aa1.73□□□□□ -2.13
HRD1YOL013C MRP17P28778 131 aa1.72□□□□□ -2.13
HRD1YOL013C NHP2P32495 156 aaPredicted RBP1.72□□□□□ -2.13
HRD1YOL013C YBL071CP38185 102 aa1.72□□□□□ -2.13
HRD1YOL013C YGL041C-BQ3E750 60 aa1.72□□□□□ -2.13
HRD1YOL013C YOR343CQ12484 108 aa1.71□□□□□ -2.14
HRD1YOL013C YGR240C-AQ3E786 66 aa1.71□□□□□ -2.14
HRD1YOL013C YOL013W-AP0C272 63 aaPredicted RBP1.7□□□□□ -2.14
HRD1YOL013C YJL009WP47078 108 aa1.7□□□□□ -2.14
HRD1YOL013C YCR001WP25347 104 aa1.69□□□□□ -2.14
HRD1YOL013C SNA2P56508 79 aa1.69□□□□□ -2.14
HRD1YOL013C YAR064WP39563 99 aa1.68□□□□□ -2.14
HRD1YOL013C LCL1Q02786 101 aa1.68□□□□□ -2.14
HRD1YOL013C YOR192C-CQ3E736 78 aa1.68□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 95.3 ms