RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeastyeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSB2YNL209W NUM1Q00402 2748 aa3.55□□□□□ -1.84
SSB2YNL209W RPL16AP26784 199 aaKnown RBP3.55□□□□□ -1.84
SSB2YNL209W YFL019CP43576 117 aa3.55□□□□□ -1.84
SSB2YNL209W COX12Q01519 83 aa3.55□□□□□ -1.84
SSB2YNL209W SPT4P32914 102 aaPredicted RBP3.54□□□□□ -1.84
SSB2YNL209W PEX17P40155 199 aa3.54□□□□□ -1.84
SSB2YNL209W EMC6Q12431 108 aa3.54□□□□□ -1.84
SSB2YNL209W TAR1Q8TGM6 124 aa3.54□□□□□ -1.84
SSB2YNL209W HTL1Q9URQ5 78 aa3.54□□□□□ -1.84
SSB2YNL209W YER145C-AA0A023PYF4 145 aa3.54□□□□□ -1.84
SSB2YNL209W Q0255P03881 472 aa3.54□□□□□ -1.84
SSB2YNL209W YFR035CP43608 114 aa3.54□□□□□ -1.84
SSB2YNL209W YLR112WQ12130 139 aa3.54□□□□□ -1.84
SSB2YNL209W YDR381C-AQ3E6R5 114 aa3.54□□□□□ -1.84
SSB2YNL209W YBR200W-AQ3E755 54 aa3.54□□□□□ -1.84
SSB2YNL209W YNL146C-AQ3E7Z1 64 aa3.54□□□□□ -1.84
SSB2YNL209W YBR182C-AQ8TGU6 64 aa3.54□□□□□ -1.84
SSB2YNL209W HMRA2P0CY13 119 aa3.53□□□□□ -1.84
SSB2YNL209W APS1P35181 156 aa3.53□□□□□ -1.84
SSB2YNL209W MIG3P39943 394 aa3.53□□□□□ -1.84
SSB2YNL209W KEG1P43614 200 aa3.53□□□□□ -1.84
SSB2YNL209W SKI6P46948 246 aaPredicted RBP3.53□□□□□ -1.84
SSB2YNL209W HAL1Q01766 294 aa3.53□□□□□ -1.84
SSB2YNL209W MGR2Q02889 113 aa3.53□□□□□ -1.84
SSB2YNL209W YOR268CQ08734 132 aa3.53□□□□□ -1.84
SSB2YNL209W CCW12Q12127 133 aa3.53□□□□□ -1.84
SSB2YNL209W TSC3Q3E790 80 aa3.53□□□□□ -1.84
SSB2YNL209W YPR053CQ6Q5F3 151 aa3.53□□□□□ -1.84
SSB2YNL209W CCW14O13547 238 aa3.52□□□□□ -1.85
SSB2YNL209W PFY1P07274 126 aa3.52□□□□□ -1.85
SSB2YNL209W RPL16BP26785 198 aaKnown RBP3.52□□□□□ -1.85
SSB2YNL209W YBR144CP34215 104 aa3.52□□□□□ -1.85
SSB2YNL209W YNL217WP40152 326 aa3.52□□□□□ -1.85
SSB2YNL209W RSM19P53733 91 aaPredicted RBP3.52□□□□□ -1.85
SSB2YNL209W YMR244WQ04018 355 aa3.52□□□□□ -1.85
SSB2YNL209W LSM6Q06406 86 aaKnown RBP3.51□□□□□ -1.85
SSB2YNL209W TDA8Q6B2U8 126 aa3.51□□□□□ -1.85
SSB2YNL209W YHR212W-AP0CX91 67 aa3.51□□□□□ -1.85
SSB2YNL209W YCL042WP25572 119 aa3.51□□□□□ -1.85
SSB2YNL209W MRPS8Q03799 155 aa3.51□□□□□ -1.85
SSB2YNL209W YDL022C-AP0C5L6 82 aa3.5□□□□□ -1.85
SSB2YNL209W YPS5P53057 165 aa3.5□□□□□ -1.85
SSB2YNL209W COA3Q3E7B2 85 aa3.5□□□□□ -1.85
SSB2YNL209W DSE2P38844 325 aa3.49□□□□□ -1.85
SSB2YNL209W YER187WP40102 141 aa3.49□□□□□ -1.85
SSB2YNL209W DCV1P43595 202 aa3.49□□□□□ -1.85
SSB2YNL209W AIR2Q12476 344 aaKnown RBP3.49□□□□□ -1.85
SSB2YNL209W RPL15AP05748 204 aaKnown RBP3.49□□□□□ -1.85
SSB2YNL209W RPL42AP0CX27 106 aaKnown RBP3.49□□□□□ -1.85
SSB2YNL209W RPL42BP0CX28 106 aaKnown RBP3.49□□□□□ -1.85
SSB2YNL209W YKL044WP36092 106 aa3.49□□□□□ -1.85
SSB2YNL209W YEL067CP39978 195 aa3.49□□□□□ -1.85
SSB2YNL209W TOS6P48560 102 aa3.49□□□□□ -1.85
SSB2YNL209W YGL193CP53097 103 aa3.49□□□□□ -1.85
SSB2YNL209W ICY1Q04329 127 aa3.49□□□□□ -1.85
SSB2YNL209W YPL261CQ08976 102 aa3.49□□□□□ -1.85
SSB2YNL209W YEL045CP32616 141 aa3.48□□□□□ -1.85
SSB2YNL209W YIA6P40556 373 aa3.48□□□□□ -1.85
SSB2YNL209W YGL088WP53151 121 aa3.48□□□□□ -1.85
SSB2YNL209W RPL11BQ3E757 174 aaPredicted RBP3.48□□□□□ -1.85
SSB2YNL209W YBR209WP38311 105 aa3.47□□□□□ -1.85
SSB2YNL209W YAL064WP39711 94 aa3.47□□□□□ -1.85
SSB2YNL209W ICS3P47034 131 aa3.47□□□□□ -1.85
SSB2YNL209W YOR008C-AQ3E7B9 74 aa3.47□□□□□ -1.85
SSB2YNL209W ATP15P21306 62 aa3.47□□□□□ -1.85
SSB2YNL209W RPL32P38061 130 aaKnown RBP3.47□□□□□ -1.85
SSB2YNL209W MET32Q12041 191 aa3.47□□□□□ -1.85
SSB2YNL209W VTC1P40046 129 aaRIP-Chip data3.46□□□□□ -1.86not detected
SSB2YNL209W YJR146WP47174 117 aa3.46□□□□□ -1.86
SSB2YNL209W YDR274CP87283 123 aa3.46□□□□□ -1.86
SSB2YNL209W YML100W-AQ8TGT0 57 aa3.46□□□□□ -1.86
SSB2YNL209W URM1P40554 99 aaPredicted RBP3.45□□□□□ -1.86
SSB2YNL209W YMR295CQ03559 197 aa3.45□□□□□ -1.86
SSB2YNL209W DDR48P18899 430 aaKnown RBP3.44□□□□□ -1.86
SSB2YNL209W TDA2P40045 126 aa3.44□□□□□ -1.86
SSB2YNL209W YNR077CP53758 84 aa3.44□□□□□ -1.86
SSB2YNL209W RPL11AP0C0W9 174 aaKnown RBP3.44□□□□□ -1.86
SSB2YNL209W RPS11AP0CX47 156 aaKnown RBP3.44□□□□□ -1.86
SSB2YNL209W RPS11BP0CX48 156 aaKnown RBP3.44□□□□□ -1.86
SSB2YNL209W MPC2P38857 129 aa3.44□□□□□ -1.86
SSB2YNL209W RSM18P40033 138 aa3.44□□□□□ -1.86
SSB2YNL209W YDR246W-AQ3E763 66 aa3.44□□□□□ -1.86
SSB2YNL209W YSY6P38374 65 aa3.43□□□□□ -1.86
SSB2YNL209W YGR035W-AQ45U48 73 aa3.43□□□□□ -1.86
SSB2YNL209W RPS8AP0CX39 200 aaKnown RBP3.42□□□□□ -1.86
SSB2YNL209W RPS8BP0CX40 200 aaKnown RBP3.42□□□□□ -1.86
SSB2YNL209W YCR001WP25347 104 aa3.42□□□□□ -1.86
SSB2YNL209W YNL190WP53872 204 aa3.42□□□□□ -1.86
SSB2YNL209W HHF1P02309 103 aaKnown RBP3.42□□□□□ -1.86
SSB2YNL209W RPL26AP05743 127 aaKnown RBP3.42□□□□□ -1.86
SSB2YNL209W KRE9P39005 276 aa3.42□□□□□ -1.86
SSB2YNL209W YEL008WP40001 126 aa3.42□□□□□ -1.86
SSB2YNL209W PBA1Q05778 276 aa3.42□□□□□ -1.86
SSB2YNL209W HUR1P45820 110 aa3.41□□□□□ -1.86
SSB2YNL209W PPT2Q12036 173 aa3.41□□□□□ -1.86
SSB2YNL209W PMP3P87284 55 aa3.4□□□□□ -1.86
SSB2YNL209W YLR194CQ05777 254 aa3.4□□□□□ -1.86
SSB2YNL209W YOR381W-AQ3E804 55 aa3.4□□□□□ -1.86
SSB2YNL209W ERI1P62651 68 aaKnown RBP3.4□□□□□ -1.87
SSB2YNL209W YFR032C-BQ8TGU2 87 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 56 ms