RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C PCL2P25693 308 aa1.74□□□□□ -2.13
SGS1YMR190C YKL069WP36088 180 aa1.74□□□□□ -2.13
SGS1YMR190C MSL1P40567 111 aaPredicted RBP1.74□□□□□ -2.13
SGS1YMR190C RPS29BP41058 56 aaKnown RBP1.74□□□□□ -2.13
SGS1YMR190C RPL33AP05744 107 aaKnown RBP1.73□□□□□ -2.13
SGS1YMR190C DDR48P18899 430 aaKnown RBP1.73□□□□□ -2.13
SGS1YMR190C RPL33BP41056 107 aaKnown RBP1.73□□□□□ -2.13
SGS1YMR190C DCV1P43595 202 aa1.73□□□□□ -2.13
SGS1YMR190C YGL149WP53116 101 aa1.73□□□□□ -2.13
SGS1YMR190C YLR194CQ05777 254 aa1.73□□□□□ -2.13
SGS1YMR190C GLO1P50107 326 aa1.73□□□□□ -2.13
SGS1YMR190C YPR014CQ6B0W2 109 aa1.73□□□□□ -2.13
SGS1YMR190C YCR043CP25361 127 aa1.73□□□□□ -2.13
SGS1YMR190C APS1P35181 156 aa1.73□□□□□ -2.13
SGS1YMR190C KRE9P39005 276 aa1.73□□□□□ -2.13
SGS1YMR190C YNL217WP40152 326 aa1.73□□□□□ -2.13
SGS1YMR190C WIP1Q2V2P8 89 aa1.72□□□□□ -2.13
SGS1YMR190C NHP2P32495 156 aaPredicted RBP1.72□□□□□ -2.13
SGS1YMR190C AIM11P87275 137 aa1.72□□□□□ -2.13
SGS1YMR190C YDR010CQ12426 110 aa1.72□□□□□ -2.13
SGS1YMR190C SCS22Q6Q595 175 aa1.72□□□□□ -2.13
SGS1YMR190C UIP3P39547 235 aa1.72□□□□□ -2.13
SGS1YMR190C YOR008C-AQ3E7B9 74 aa1.72□□□□□ -2.13
SGS1YMR190C Q0032Q9ZZX7 96 aa1.72□□□□□ -2.13
SGS1YMR190C YNL198CP40166 100 aa1.71□□□□□ -2.14
SGS1YMR190C ARC15P40518 154 aaRIP-Chip data1.71□□□□□ -2.14 RIP-Chip
SGS1YMR190C YLR363W-AQ3E747 85 aa1.71□□□□□ -2.14
SGS1YMR190C NRG2P38082 220 aa1.7□□□□□ -2.14
SGS1YMR190C GLC8P41818 229 aa1.7□□□□□ -2.14
SGS1YMR190C UBC4P15731 148 aa1.7□□□□□ -2.14
SGS1YMR190C YIL102C-AQ2V2P5 75 aa1.7□□□□□ -2.14
SGS1YMR190C YBR219CP38317 127 aa1.7□□□□□ -2.14
SGS1YMR190C YEL008WP40001 126 aa1.7□□□□□ -2.14
SGS1YMR190C IGO2Q9P305 131 aa1.7□□□□□ -2.14
SGS1YMR190C RPC10P40422 70 aa1.7□□□□□ -2.14
SGS1YMR190C YPL261CQ08976 102 aa1.7□□□□□ -2.14
SGS1YMR190C ATP15P21306 62 aa1.69□□□□□ -2.14
SGS1YMR190C SHU1P38751 150 aa1.69□□□□□ -2.14
SGS1YMR190C CWC27Q02770 301 aa1.69□□□□□ -2.14
SGS1YMR190C POP7P38291 140 aa1.69□□□□□ -2.14
SGS1YMR190C PEX17P40155 199 aa1.69□□□□□ -2.14
SGS1YMR190C YBL039W-BP0C268 59 aa1.68□□□□□ -2.14
SGS1YMR190C YLL066W-BQ8TGJ7 56 aa1.68□□□□□ -2.14
SGS1YMR190C COX14P39103 70 aa1.68□□□□□ -2.14
SGS1YMR190C YMR295CQ03559 197 aa1.68□□□□□ -2.14
SGS1YMR190C CPR1P14832 162 aaKnown RBP1.68□□□□□ -2.14
SGS1YMR190C OXA1P39952 402 aa1.68□□□□□ -2.14
SGS1YMR190C YFR057WP43625 151 aa1.68□□□□□ -2.14
SGS1YMR190C YNL162W-AQ3E7A8 72 aa1.68□□□□□ -2.14
SGS1YMR190C YAL065CO13511 128 aa1.67□□□□□ -2.14
SGS1YMR190C SFT1P43682 97 aa1.67□□□□□ -2.14
SGS1YMR190C UBC11P52492 156 aa1.67□□□□□ -2.14
SGS1YMR190C YMR320WQ04897 101 aa1.67□□□□□ -2.14
SGS1YMR190C YCL021W-AQ96VH3 125 aa1.67□□□□□ -2.14
SGS1YMR190C QCR8P08525 94 aa1.67□□□□□ -2.14
SGS1YMR190C YML079WQ03629 201 aa1.67□□□□□ -2.14
SGS1YMR190C YBR182C-AQ8TGU6 64 aa1.67□□□□□ -2.14
SGS1YMR190C TOA2P32774 122 aa1.67□□□□□ -2.14
SGS1YMR190C YDR115WQ04598 105 aa1.67□□□□□ -2.14
SGS1YMR190C CWP2P43497 92 aa1.66□□□□□ -2.14
SGS1YMR190C ELC1Q03071 99 aa1.66□□□□□ -2.14
SGS1YMR190C LSM6Q06406 86 aaKnown RBP1.66□□□□□ -2.14
SGS1YMR190C FYV12Q08559 129 aa1.66□□□□□ -2.14
SGS1YMR190C YAR1P46683 200 aa1.66□□□□□ -2.14
SGS1YMR190C YER181CP40097 107 aa1.66□□□□□ -2.14
SGS1YMR190C IGD1P43598 195 aa1.66□□□□□ -2.14
SGS1YMR190C YGR121W-AQ3E816 71 aa1.66□□□□□ -2.14
SGS1YMR190C AQY2P0CD90 149 aa1.65□□□□□ -2.14
SGS1YMR190C AIM29P36154 155 aa1.65□□□□□ -2.14
SGS1YMR190C EDC2P40023 145 aaPredicted RBP1.65□□□□□ -2.14
SGS1YMR190C YER085CP40058 173 aa1.65□□□□□ -2.14
SGS1YMR190C YNL190WP53872 204 aa1.65□□□□□ -2.14
SGS1YMR190C YOR268CQ08734 132 aa1.65□□□□□ -2.14
SGS1YMR190C RPL28P02406 149 aaKnown RBP1.65□□□□□ -2.15
SGS1YMR190C RPL29P05747 59 aaPredicted RBP1.65□□□□□ -2.15
SGS1YMR190C YLR156WP0CE96 114 aa1.65□□□□□ -2.15
SGS1YMR190C YLR159WP0CE97 114 aa1.65□□□□□ -2.15
SGS1YMR190C YLR161WP0CE98 114 aa1.65□□□□□ -2.15
SGS1YMR190C YLR157W-DP0CE99 70 aa1.65□□□□□ -2.15
SGS1YMR190C TMA7Q3E764 64 aaKnown RBP1.65□□□□□ -2.15
SGS1YMR190C PAI3P01094 68 aa1.65□□□□□ -2.15
SGS1YMR190C YML054C-AQ3E809 52 aa1.65□□□□□ -2.15
SGS1YMR190C YLR236CA0A023PZG4 107 aa1.64□□□□□ -2.15
SGS1YMR190C STF1P01098 86 aa1.64□□□□□ -2.15
SGS1YMR190C YGL088WP53151 121 aa1.64□□□□□ -2.15
SGS1YMR190C EOS1P53938 366 aa1.64□□□□□ -2.15
SGS1YMR190C RGM1Q00453 211 aa1.64□□□□□ -2.15
SGS1YMR190C YBL081WP38180 368 aaKnown RBP1.64□□□□□ -2.15
SGS1YMR190C YOR020W-AQ3E824 90 aa1.64□□□□□ -2.15
SGS1YMR190C RPL18AP0CX49 186 aaKnown RBP1.64□□□□□ -2.15
SGS1YMR190C RPL18BP0CX50 186 aaKnown RBP1.64□□□□□ -2.15
SGS1YMR190C YBR209WP38311 105 aa1.64□□□□□ -2.15
SGS1YMR190C YIL059CP40520 121 aa1.64□□□□□ -2.15
SGS1YMR190C YJR085CP47131 105 aaKnown RBP1.64□□□□□ -2.15
SGS1YMR190C MDN1Q12019 4910 aaKnown RBP1.63□□□□□ -2.15
SGS1YMR190C YOR304C-AO14468 76 aa1.63□□□□□ -2.15
SGS1YMR190C MSA2P36157 363 aa1.63□□□□□ -2.15
SGS1YMR190C YPR195CQ06594 109 aa1.63□□□□□ -2.15
SGS1YMR190C ADH1P00330 348 aaKnown RBP1.63□□□□□ -2.15
SGS1YMR190C YLL006W-AQ3E814 58 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms