RNA–Protein interactions for RNA: YML085C

TUB1, Transcript of Alpha-tubulin, yeast

Gene TUB1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Peroxisome .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TUB1	YML085C	SMD1	Q02260	146 aa	Predicted RBP	4.83	□□□□□ -1.64
TUB1	YML085C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.83	□□□□□ -1.64
TUB1	YML085C	YBL081W	P38180	368 aa	Known RBP	4.82	□□□□□ -1.64
TUB1	YML085C	CWP2	P43497	92 aa		4.82	□□□□□ -1.64
TUB1	YML085C	YML079W	Q03629	201 aa		4.82	□□□□□ -1.64
TUB1	YML085C	LCL2	Q08045	131 aa		4.82	□□□□□ -1.64
TUB1	YML085C	ECM12	O13529	151 aa		4.81	□□□□□ -1.64
TUB1	YML085C	YBL039W-B	P0C268	59 aa		4.8	□□□□□ -1.64
TUB1	YML085C	MVB12	P42939	101 aa		4.8	□□□□□ -1.64
TUB1	YML085C	YFL019C	P43576	117 aa		4.8	□□□□□ -1.64
TUB1	YML085C	LCL1	Q02786	101 aa		4.8	□□□□□ -1.64
TUB1	YML085C	NAT5	Q08689	176 aa		4.8	□□□□□ -1.64
TUB1	YML085C	SAE3	P89114	91 aa		4.79	□□□□□ -1.64
TUB1	YML085C	PAU23	Q07987	124 aa		4.79	□□□□□ -1.64
TUB1	YML085C	PAU17	Q12370	124 aa		4.79	□□□□□ -1.64
TUB1	YML085C	STF1	P01098	86 aa		4.78	□□□□□ -1.64
TUB1	YML085C	RPL28	P02406	149 aa	Known RBP	4.78	□□□□□ -1.64
TUB1	YML085C	CDC43	P18898	376 aa		4.78	□□□□□ -1.64
TUB1	YML085C	YOR020W-A	Q3E824	90 aa		4.78	□□□□□ -1.64
TUB1	YML085C	Q0032	Q9ZZX7	96 aa		4.78	□□□□□ -1.64
TUB1	YML085C	RPL29	P05747	59 aa	Predicted RBP	4.77	□□□□□ -1.65
TUB1	YML085C	YDL022C-A	P0C5L6	82 aa		4.77	□□□□□ -1.65
TUB1	YML085C	UGX2	P32772	223 aa		4.77	□□□□□ -1.65
TUB1	YML085C	CWC27	Q02770	301 aa		4.77	□□□□□ -1.65
TUB1	YML085C	UBC11	P52492	156 aa		4.76	□□□□□ -1.65
TUB1	YML085C	MRPS12	P53732	153 aa		4.76	□□□□□ -1.65
TUB1	YML085C	ELC1	Q03071	99 aa		4.76	□□□□□ -1.65
TUB1	YML085C	YLL006W-A	Q3E814	58 aa		4.76	□□□□□ -1.65
TUB1	YML085C	RPL26A	P05743	127 aa	Known RBP	4.75	□□□□□ -1.65
TUB1	YML085C	SCM4	P32564	187 aa		4.75	□□□□□ -1.65
TUB1	YML085C	PEX22	P39718	180 aa		4.75	□□□□□ -1.65
TUB1	YML085C	RPL26B	P53221	127 aa	Known RBP	4.75	□□□□□ -1.65
TUB1	YML085C	COX10	P21592	462 aa		4.74	□□□□□ -1.65
TUB1	YML085C	YIA6	P40556	373 aa		4.74	□□□□□ -1.65
TUB1	YML085C	YNR077C	P53758	84 aa		4.74	□□□□□ -1.65
TUB1	YML085C	YLR363W-A	Q3E747	85 aa		4.74	□□□□□ -1.65
TUB1	YML085C	YLR307C-A	Q3E825	87 aa		4.74	□□□□□ -1.65
TUB1	YML085C	YER039C-A	P0CD97	72 aa		4.73	□□□□□ -1.65
TUB1	YML085C	GLC8	P41818	229 aa		4.73	□□□□□ -1.65
TUB1	YML085C	HPA2	Q06592	156 aa		4.73	□□□□□ -1.65
TUB1	YML085C	YHR130C	P38834	111 aa		4.72	□□□□□ -1.65
TUB1	YML085C	YEL067C	P39978	195 aa		4.72	□□□□□ -1.65
TUB1	YML085C	AIM19	P40502	157 aa		4.72	□□□□□ -1.65
TUB1	YML085C	UBC4	P15731	148 aa		4.72	□□□□□ -1.65
TUB1	YML085C	SMP1	P38128	452 aa		4.72	□□□□□ -1.65
TUB1	YML085C	RGM1	Q00453	211 aa		4.72	□□□□□ -1.65
TUB1	YML085C	YKL023C-A	Q2V2P3	75 aa		4.72	□□□□□ -1.65
TUB1	YML085C	POP7	P38291	140 aa		4.71	□□□□□ -1.66
TUB1	YML085C	YER181C	P40097	107 aa		4.71	□□□□□ -1.66
TUB1	YML085C	MHR1	Q06630	226 aa		4.71	□□□□□ -1.66
TUB1	YML085C	KNH1	P50112	268 aa		4.7	□□□□□ -1.66
TUB1	YML085C	YGL193C	P53097	103 aa		4.7	□□□□□ -1.66
TUB1	YML085C	MMS2	P53152	137 aa		4.7	□□□□□ -1.66
TUB1	YML085C	YNL190W	P53872	204 aa		4.7	□□□□□ -1.66
TUB1	YML085C	PAI3	P01094	68 aa		4.69	□□□□□ -1.66
TUB1	YML085C	YFR057W	P43625	151 aa		4.69	□□□□□ -1.66
TUB1	YML085C	YBL112C	Q3E7Y4	105 aa		4.69	□□□□□ -1.66
TUB1	YML085C	MDN1	Q12019	4910 aa	Known RBP	4.68	□□□□□ -1.66
TUB1	YML085C	NHP2	P32495	156 aa	Predicted RBP	4.68	□□□□□ -1.66
TUB1	YML085C	EOS1	P53938	366 aa		4.68	□□□□□ -1.66
TUB1	YML085C	ICY1	Q04329	127 aa		4.68	□□□□□ -1.66
TUB1	YML085C	YLR415C	O13578	112 aa		4.67	□□□□□ -1.66
TUB1	YML085C	IRC21	Q04772	201 aa		4.66	□□□□□ -1.66
TUB1	YML085C	YLR296W	Q05898	108 aa		4.66	□□□□□ -1.66
TUB1	YML085C	YNL162W-A	Q3E7A8	72 aa		4.66	□□□□□ -1.66
TUB1	YML085C	YNL042W-B	Q3E7Z2	85 aa		4.66	□□□□□ -1.66
TUB1	YML085C	CPR1	P14832	162 aa	Known RBP	4.65	□□□□□ -1.67
TUB1	YML085C	DUT1	P33317	147 aa		4.65	□□□□□ -1.67
TUB1	YML085C	MID2	P36027	376 aa		4.65	□□□□□ -1.67
TUB1	YML085C	YKL069W	P36088	180 aa		4.65	□□□□□ -1.67
TUB1	YML085C	IGD1	P43598	195 aa		4.65	□□□□□ -1.67
TUB1	YML085C	LSM6	Q06406	86 aa	Known RBP	4.65	□□□□□ -1.67
TUB1	YML085C	LSO2	Q3E772	92 aa	Known RBP	4.65	□□□□□ -1.67
TUB1	YML085C	SPT4	P32914	102 aa	Predicted RBP	4.64	□□□□□ -1.67
TUB1	YML085C	SFT1	P43682	97 aa		4.64	□□□□□ -1.67
TUB1	YML085C	YLR236C	A0A023PZG4	107 aa		4.63	□□□□□ -1.67
TUB1	YML085C	MRPL24	P36525	258 aa	Predicted RBP	4.63	□□□□□ -1.67
TUB1	YML085C	FYV5	P25585	152 aa		4.62	□□□□□ -1.67
TUB1	YML085C	ARO2	P28777	376 aa	Known RBP	4.62	□□□□□ -1.67
TUB1	YML085C	DDR2	P89113	61 aa		4.62	□□□□□ -1.67
TUB1	YML085C	YPL257W	Q08974	193 aa		4.62	□□□□□ -1.67
TUB1	YML085C	HUR1	P45820	110 aa		4.61	□□□□□ -1.67
TUB1	YML085C	YJL127C-B	Q3E828	52 aa		4.61	□□□□□ -1.67
TUB1	YML085C	SPG1	P50088	95 aa		4.6	□□□□□ -1.67
TUB1	YML085C	YIL102C-A	Q2V2P5	75 aa		4.6	□□□□□ -1.67
TUB1	YML085C	YBR230W-A	Q3E762	66 aa		4.6	□□□□□ -1.67
TUB1	YML085C	YGR121W-A	Q3E816	71 aa		4.59	□□□□□ -1.67
TUB1	YML085C	EDC2	P40023	145 aa	Predicted RBP	4.58	□□□□□ -1.68
TUB1	YML085C	YFL067W	P43537	175 aa		4.58	□□□□□ -1.68
TUB1	YML085C	HYP2	P23301	157 aa	Known RBP	4.55	□□□□□ -1.68
TUB1	YML085C	YJR085C	P47131	105 aa	Known RBP	4.55	□□□□□ -1.68
TUB1	YML085C	YGL149W	P53116	101 aa		4.55	□□□□□ -1.68
TUB1	YML085C	BET1	P22804	142 aa		4.54	□□□□□ -1.68
TUB1	YML085C	MSA2	P36157	363 aa		4.54	□□□□□ -1.68
TUB1	YML085C	UIP3	P39547	235 aa		4.54	□□□□□ -1.68
TUB1	YML085C	TSC3	Q3E790	80 aa		4.54	□□□□□ -1.68
TUB1	YML085C	YAR1	P46683	200 aa		4.53	□□□□□ -1.68
TUB1	YML085C	OST2	P46964	130 aa		4.53	□□□□□ -1.68
TUB1	YML085C	YOR268C	Q08734	132 aa		4.53	□□□□□ -1.68
TUB1	YML085C	YLR156W	P0CE96	114 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms