RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C RPL16AP26784 199 aaKnown RBP3.32□□□□□ -1.88
CDC42YLR229C RPL16BP26785 198 aaKnown RBP3.32□□□□□ -1.88
CDC42YLR229C YCH1P42937 148 aa3.32□□□□□ -1.88
CDC42YLR229C YDR029WQ12111 104 aa3.32□□□□□ -1.88
CDC42YLR229C PRM7Q12459 698 aa3.32□□□□□ -1.88
CDC42YLR229C YDR119W-AQ2V2P9 66 aa3.32□□□□□ -1.88
CDC42YLR229C YPL038W-AQ3E7B4 63 aa3.32□□□□□ -1.88
CDC42YLR229C YOR020W-AQ3E824 90 aa3.32□□□□□ -1.88
CDC42YLR229C YCL021W-AQ96VH3 125 aa3.32□□□□□ -1.88
CDC42YLR229C BPH1P25356 2167 aa3.31□□□□□ -1.88
CDC42YLR229C RPL15AP05748 204 aaKnown RBP3.31□□□□□ -1.88
CDC42YLR229C MID2P36027 376 aa3.31□□□□□ -1.88
CDC42YLR229C SMP1P38128 452 aa3.31□□□□□ -1.88
CDC42YLR229C YGR025WP53216 100 aa3.31□□□□□ -1.88
CDC42YLR229C YPR013CQ12145 317 aa3.31□□□□□ -1.88
CDC42YLR229C YDR381C-AQ3E6R5 114 aa3.31□□□□□ -1.88
CDC42YLR229C YNL146C-AQ3E7Z1 64 aa3.31□□□□□ -1.88
CDC42YLR229C GCN1P33892 2672 aaKnown RBP3.3□□□□□ -1.88
CDC42YLR229C YSY6P38374 65 aa3.3□□□□□ -1.88
CDC42YLR229C KNH1P50112 268 aa3.3□□□□□ -1.88
CDC42YLR229C MRPS12P53732 153 aa3.3□□□□□ -1.88
CDC42YLR229C YBL112CQ3E7Y4 105 aa3.3□□□□□ -1.88
CDC42YLR229C YOR011W-AQ3E807 68 aa3.3□□□□□ -1.88
CDC42YLR229C MSA2P36157 363 aa3.29□□□□□ -1.88
CDC42YLR229C YCR041WP37265 110 aa3.29□□□□□ -1.88
CDC42YLR229C YBR209WP38311 105 aa3.29□□□□□ -1.88
CDC42YLR229C SVP26P38869 228 aa3.29□□□□□ -1.88
CDC42YLR229C RRT13P40042 185 aa3.29□□□□□ -1.88
CDC42YLR229C YNL190WP53872 204 aa3.29□□□□□ -1.88
CDC42YLR229C PMP3P87284 55 aa3.29□□□□□ -1.88
CDC42YLR229C RGM1Q00453 211 aa3.29□□□□□ -1.88
CDC42YLR229C YLR042CQ07990 161 aa3.29□□□□□ -1.88
CDC42YLR229C PRP8P33334 2413 aaKnown RBP3.28□□□□□ -1.88
CDC42YLR229C YEL008WP40001 126 aa3.28□□□□□ -1.88
CDC42YLR229C YER135CP40082 130 aa3.28□□□□□ -1.88
CDC42YLR229C YPL229WQ99395 206 aa3.28□□□□□ -1.88
CDC42YLR229C RPR2P40571 144 aa3.27□□□□□ -1.89
CDC42YLR229C SBH1P52870 82 aa3.27□□□□□ -1.89
CDC42YLR229C YOL085CQ99345 113 aa3.27□□□□□ -1.89
CDC42YLR229C YBR121C-AP0C5L4 52 aa3.26□□□□□ -1.89
CDC42YLR229C YJR107C-AP0CT86 78 aa3.26□□□□□ -1.89
CDC42YLR229C UBC5P15732 148 aa3.26□□□□□ -1.89
CDC42YLR229C ARC15P40518 154 aaRIP-Chip data3.26□□□□□ -1.89not detected
CDC42YLR229C YMR244WQ04018 355 aa3.26□□□□□ -1.89
CDC42YLR229C KTI11Q3E840 82 aa3.26□□□□□ -1.89
CDC42YLR229C RPL2AP0CX45 254 aaKnown RBP3.25□□□□□ -1.89
CDC42YLR229C RPL2BP0CX46 254 aaKnown RBP3.25□□□□□ -1.89
CDC42YLR229C YCL042WP25572 119 aa3.25□□□□□ -1.89
CDC42YLR229C YHL018WP38744 120 aaPredicted RBP3.25□□□□□ -1.89
CDC42YLR229C MIG3P39943 394 aa3.25□□□□□ -1.89
CDC42YLR229C ALG13P53178 202 aa3.25□□□□□ -1.89
CDC42YLR229C MRPS8Q03799 155 aa3.25□□□□□ -1.89
CDC42YLR229C IRC21Q04772 201 aa3.25□□□□□ -1.89
CDC42YLR229C YKL183C-AQ3E765 70 aa3.25□□□□□ -1.89
CDC42YLR229C TSC3Q3E790 80 aa3.25□□□□□ -1.89
CDC42YLR229C TAR1Q8TGM6 124 aa3.25□□□□□ -1.89
CDC42YLR229C MEC1P38111 2368 aa3.24□□□□□ -1.89
CDC42YLR229C YLR236CA0A023PZG4 107 aa3.24□□□□□ -1.89
CDC42YLR229C YER039C-AP0CD97 72 aa3.24□□□□□ -1.89
CDC42YLR229C YHR212W-AP0CX91 67 aa3.24□□□□□ -1.89
CDC42YLR229C COX14P39103 70 aa3.24□□□□□ -1.89
CDC42YLR229C YGL088WP53151 121 aa3.24□□□□□ -1.89
CDC42YLR229C RSM19P53733 91 aaPredicted RBP3.24□□□□□ -1.89
CDC42YLR229C TRA1P38811 3744 aa3.24□□□□□ -1.89
CDC42YLR229C URA2P07259 2214 aaKnown RBP3.24□□□□□ -1.89
CDC42YLR229C YCR050CP25630 102 aa3.23□□□□□ -1.89
CDC42YLR229C YRA2P36036 203 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
CDC42YLR229C ERI1P62651 68 aaKnown RBP3.23□□□□□ -1.89
CDC42YLR229C YLR285C-AQ3E771 56 aa3.23□□□□□ -1.89
CDC42YLR229C RPS11AP0CX47 156 aaKnown RBP3.22□□□□□ -1.89
CDC42YLR229C RPS11BP0CX48 156 aaKnown RBP3.22□□□□□ -1.89
CDC42YLR229C ATP18P81450 59 aa3.22□□□□□ -1.89
CDC42YLR229C YMR295CQ03559 197 aa3.22□□□□□ -1.89
CDC42YLR229C VAM10Q08474 114 aa3.22□□□□□ -1.89
CDC42YLR229C YLL006W-AQ3E814 58 aa3.22□□□□□ -1.89
CDC42YLR229C RPL26AP05743 127 aaKnown RBP3.21□□□□□ -1.9
CDC42YLR229C RPS28BP0C0X0 67 aaKnown RBP3.21□□□□□ -1.9
CDC42YLR229C TDA2P40045 126 aa3.21□□□□□ -1.9
CDC42YLR229C YER187WP40102 141 aa3.21□□□□□ -1.9
CDC42YLR229C YFR035CP43608 114 aa3.21□□□□□ -1.9
CDC42YLR229C RPL26BP53221 127 aaKnown RBP3.21□□□□□ -1.9
CDC42YLR229C RPS28AQ3E7X9 67 aaPredicted RBP3.21□□□□□ -1.9
CDC42YLR229C YGR035W-AQ45U48 73 aa3.21□□□□□ -1.9
CDC42YLR229C TOR1P35169 2470 aa3.21□□□□□ -1.9
CDC42YLR229C BET1P22804 142 aa3.2□□□□□ -1.9
CDC42YLR229C KRE9P39005 276 aa3.2□□□□□ -1.9
CDC42YLR229C HAL1Q01766 294 aa3.2□□□□□ -1.9
CDC42YLR229C ICY1Q04329 127 aa3.2□□□□□ -1.9
CDC42YLR229C YDL241WQ07738 123 aa3.2□□□□□ -1.9
CDC42YLR229C YLR412C-AQ3E742 68 aa3.2□□□□□ -1.9
CDC42YLR229C YMR175W-AQ3E766 64 aa3.2□□□□□ -1.9
CDC42YLR229C YMR122W-AQ3E842 84 aa3.2□□□□□ -1.9
CDC42YLR229C RPL29P05747 59 aaPredicted RBP3.19□□□□□ -1.9
CDC42YLR229C YLR156WP0CE96 114 aa3.19□□□□□ -1.9
CDC42YLR229C YLR159WP0CE97 114 aa3.19□□□□□ -1.9
CDC42YLR229C YLR161WP0CE98 114 aa3.19□□□□□ -1.9
CDC42YLR229C AIM4P38305 123 aaPredicted RBP3.19□□□□□ -1.9
CDC42YLR229C YFL067WP43537 175 aa3.19□□□□□ -1.9
CDC42YLR229C YPS5P53057 165 aa3.19□□□□□ -1.9
CDC42YLR229C YDR274CP87283 123 aa3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 113.6 ms