RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W Q0032Q9ZZX7 96 aa6.62□□□□□ -1.35
UBA4YHR111W DUT1P33317 147 aa6.61□□□□□ -1.35
UBA4YHR111W MRPS12P53732 153 aa6.61□□□□□ -1.35
UBA4YHR111W YBL039W-BP0C268 59 aa6.6□□□□□ -1.35
UBA4YHR111W DDR48P18899 430 aaKnown RBP6.6□□□□□ -1.35
UBA4YHR111W YFL019CP43576 117 aa6.6□□□□□ -1.35
UBA4YHR111W RPL28P02406 149 aaKnown RBP6.59□□□□□ -1.35
UBA4YHR111W MBF1O14467 151 aaKnown RBP6.58□□□□□ -1.36
UBA4YHR111W HAC1P41546 238 aa6.58□□□□□ -1.36
UBA4YHR111W HAP3P13434 144 aa6.57□□□□□ -1.36
UBA4YHR111W SEC11P15367 167 aa6.57□□□□□ -1.36
UBA4YHR111W CDC43P18898 376 aa6.57□□□□□ -1.36
UBA4YHR111W IGD1P43598 195 aa6.57□□□□□ -1.36
UBA4YHR111W YBL112CQ3E7Y4 105 aa6.57□□□□□ -1.36
UBA4YHR111W YLL006W-AQ3E814 58 aa6.57□□□□□ -1.36
UBA4YHR111W COA6Q3E846 104 aa6.57□□□□□ -1.36
UBA4YHR111W YKL044WP36092 106 aa6.56□□□□□ -1.36
UBA4YHR111W MRPL44P19956 98 aa6.55□□□□□ -1.36
UBA4YHR111W YEL067CP39978 195 aa6.55□□□□□ -1.36
UBA4YHR111W YPL073CP40323 161 aa6.54□□□□□ -1.36
UBA4YHR111W EOS1P53938 366 aa6.54□□□□□ -1.36
UBA4YHR111W YML079WQ03629 201 aa6.54□□□□□ -1.36
UBA4YHR111W YGL230CP53074 147 aa6.53□□□□□ -1.36
UBA4YHR111W YGL193CP53097 103 aa6.53□□□□□ -1.36
UBA4YHR111W YNL190WP53872 204 aa6.53□□□□□ -1.36
UBA4YHR111W IGO2Q9P305 131 aa6.53□□□□□ -1.36
UBA4YHR111W UGX2P32772 223 aa6.52□□□□□ -1.37
UBA4YHR111W MSL1P40567 111 aaPredicted RBP6.52□□□□□ -1.37
UBA4YHR111W UBC11P52492 156 aa6.52□□□□□ -1.37
UBA4YHR111W YNR077CP53758 84 aa6.51□□□□□ -1.37
UBA4YHR111W RPL29P05747 59 aaPredicted RBP6.5□□□□□ -1.37
UBA4YHR111W YDR010CQ12426 110 aa6.5□□□□□ -1.37
UBA4YHR111W YKL023C-AQ2V2P3 75 aa6.5□□□□□ -1.37
UBA4YHR111W HPA2Q06592 156 aa6.49□□□□□ -1.37
UBA4YHR111W YLR415CO13578 112 aa6.48□□□□□ -1.37
UBA4YHR111W KNH1P50112 268 aa6.48□□□□□ -1.37
UBA4YHR111W MHR1Q06630 226 aa6.48□□□□□ -1.37
UBA4YHR111W UBC4P15731 148 aa6.47□□□□□ -1.37
UBA4YHR111W ATP5P09457 212 aa6.46□□□□□ -1.38
UBA4YHR111W HYP2P23301 157 aaKnown RBP6.46□□□□□ -1.38
UBA4YHR111W YFR057WP43625 151 aa6.46□□□□□ -1.38
UBA4YHR111W YDL157CQ12082 118 aa6.46□□□□□ -1.38
UBA4YHR111W YGL149WP53116 101 aa6.45□□□□□ -1.38
UBA4YHR111W YNL162W-AQ3E7A8 72 aa6.45□□□□□ -1.38
UBA4YHR111W CPR1P14832 162 aaKnown RBP6.44□□□□□ -1.38
UBA4YHR111W MID2P36027 376 aa6.44□□□□□ -1.38
UBA4YHR111W YER039C-AP0CD97 72 aa6.42□□□□□ -1.38
UBA4YHR111W CGR1P53188 120 aa6.42□□□□□ -1.38
UBA4YHR111W YJL197C-AP0C5P0 93 aa6.41□□□□□ -1.38
UBA4YHR111W YLR156WP0CE96 114 aa6.41□□□□□ -1.38
UBA4YHR111W YLR159WP0CE97 114 aa6.41□□□□□ -1.38
UBA4YHR111W YLR161WP0CE98 114 aa6.41□□□□□ -1.38
UBA4YHR111W YCR007CP25354 239 aa6.41□□□□□ -1.38
UBA4YHR111W NAT5Q08689 176 aa6.41□□□□□ -1.38
UBA4YHR111W YOR020W-AQ3E824 90 aa6.41□□□□□ -1.38
UBA4YHR111W YIA6P40556 373 aa6.4□□□□□ -1.39
UBA4YHR111W RPL26AP05743 127 aaKnown RBP6.39□□□□□ -1.39
UBA4YHR111W FUN14P18411 198 aa6.39□□□□□ -1.39
UBA4YHR111W RPL26BP53221 127 aaKnown RBP6.39□□□□□ -1.39
UBA4YHR111W FYV7Q12247 151 aa6.39□□□□□ -1.39
UBA4YHR111W SCM4P32564 187 aa6.38□□□□□ -1.39
UBA4YHR111W EDC2P40023 145 aaPredicted RBP6.38□□□□□ -1.39
UBA4YHR111W RGM1Q00453 211 aa6.38□□□□□ -1.39
UBA4YHR111W PAU17Q12370 124 aa6.38□□□□□ -1.39
UBA4YHR111W COX10P21592 462 aa6.37□□□□□ -1.39
UBA4YHR111W DDR2P89113 61 aa6.37□□□□□ -1.39
UBA4YHR111W IRC21Q04772 201 aa6.37□□□□□ -1.39
UBA4YHR111W YOR268CQ08734 132 aa6.37□□□□□ -1.39
UBA4YHR111W YPL257WQ08974 193 aa6.37□□□□□ -1.39
UBA4YHR111W YNL042W-BQ3E7Z2 85 aa6.37□□□□□ -1.39
UBA4YHR111W ICY1Q04329 127 aa6.35□□□□□ -1.39
UBA4YHR111W YBR230W-AQ3E762 66 aa6.34□□□□□ -1.39
UBA4YHR111W SPT4P32914 102 aaPredicted RBP6.33□□□□□ -1.4
UBA4YHR111W SPG1P50088 95 aa6.33□□□□□ -1.4
UBA4YHR111W ARO2P28777 376 aaKnown RBP6.32□□□□□ -1.4
UBA4YHR111W ELC1Q03071 99 aa6.32□□□□□ -1.4
UBA4YHR111W YGR121W-AQ3E816 71 aa6.32□□□□□ -1.4
UBA4YHR111W YJL127C-BQ3E828 52 aa6.32□□□□□ -1.4
UBA4YHR111W YHR130CP38834 111 aa6.3□□□□□ -1.4
UBA4YHR111W YJR085CP47131 105 aaKnown RBP6.3□□□□□ -1.4
UBA4YHR111W FYV5P25585 152 aa6.28□□□□□ -1.4
UBA4YHR111W YOR034C-AQ3E735 80 aa6.27□□□□□ -1.41
UBA4YHR111W KTI11Q3E840 82 aa6.26□□□□□ -1.41
UBA4YHR111W BSC4P53841 131 aa6.25□□□□□ -1.41
UBA4YHR111W YLR236CA0A023PZG4 107 aa6.25□□□□□ -1.41
UBA4YHR111W KRE1P17260 313 aa6.25□□□□□ -1.41
UBA4YHR111W PAU23Q07987 124 aa6.25□□□□□ -1.41
UBA4YHR111W LSM8P47093 109 aaKnown RBP6.24□□□□□ -1.41
UBA4YHR111W YHR007C-AQ07074 71 aa6.23□□□□□ -1.41
UBA4YHR111W YER181CP40097 107 aa6.22□□□□□ -1.41
UBA4YHR111W SAE3P89114 91 aa6.22□□□□□ -1.41
UBA4YHR111W YLR363W-AQ3E747 85 aa6.22□□□□□ -1.41
UBA4YHR111W YDL085C-AQ3E7B7 68 aaKnown RBP6.22□□□□□ -1.41
UBA4YHR111W KSH1Q8TGJ3 72 aa6.21□□□□□ -1.42
UBA4YHR111W NHP2P32495 156 aaPredicted RBP6.19□□□□□ -1.42
UBA4YHR111W MRPL24P36525 258 aaPredicted RBP6.19□□□□□ -1.42
UBA4YHR111W YOR072WQ08486 104 aa6.19□□□□□ -1.42
UBA4YHR111W YMR230W-AQ3E7B5 62 aa6.19□□□□□ -1.42
UBA4YHR111W BET1P22804 142 aa6.18□□□□□ -1.42
UBA4YHR111W PAI3P01094 68 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms