RNA–Protein interactions for RNA: YHR056C

RSC30, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC30, Length 2,652 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC30	YHR056C	YIL014C-A	Q02598	104 aa		3.15	□□□□□ -1.91
RSC30	YHR056C	HTL1	Q9URQ5	78 aa		3.15	□□□□□ -1.91
RSC30	YHR056C	PRE1	P22141	198 aa	Known RBP	3.15	□□□□□ -1.91
RSC30	YHR056C	YNL122C	P53921	115 aa	Predicted RBP	3.15	□□□□□ -1.91
RSC30	YHR056C	COX10	P21592	462 aa		3.14	□□□□□ -1.91
RSC30	YHR056C	HOT13	P36078	116 aa		3.14	□□□□□ -1.91
RSC30	YHR056C	YPR014C	Q6B0W2	109 aa		3.13	□□□□□ -1.91
RSC30	YHR056C	YHL005C	P38752	130 aa		3.13	□□□□□ -1.91
RSC30	YHR056C	YPL257W	Q08974	193 aa		3.13	□□□□□ -1.91
RSC30	YHR056C	UGX2	P32772	223 aa		3.12	□□□□□ -1.91
RSC30	YHR056C	YML079W	Q03629	201 aa		3.12	□□□□□ -1.91
RSC30	YHR056C	ATP15	P21306	62 aa		3.12	□□□□□ -1.91
RSC30	YHR056C	YGL118C	P53132	145 aa		3.12	□□□□□ -1.91
RSC30	YHR056C	YLL006W-A	Q3E814	58 aa		3.12	□□□□□ -1.91
RSC30	YHR056C	COX7	P10174	60 aa		3.11	□□□□□ -1.91
RSC30	YHR056C	SRB6	P32570	121 aa		3.11	□□□□□ -1.91
RSC30	YHR056C	YCR043C	P25361	127 aa		3.11	□□□□□ -1.91
RSC30	YHR056C	YNL162W-A	Q3E7A8	72 aa		3.11	□□□□□ -1.91
RSC30	YHR056C	SEC4	P07560	215 aa	Known RBP	3.1	□□□□□ -1.91
RSC30	YHR056C	UBC11	P52492	156 aa		3.1	□□□□□ -1.91
RSC30	YHR056C	Q0142	Q9ZZW4	58 aa		3.1	□□□□□ -1.91
RSC30	YHR056C	YEL045C	P32616	141 aa		3.09	□□□□□ -1.91
RSC30	YHR056C	ISU2	Q12056	156 aa		3.09	□□□□□ -1.91
RSC30	YHR056C	RPL27B	P0C2H7	136 aa	Known RBP	3.09	□□□□□ -1.91
RSC30	YHR056C	SOH1	P38633	127 aa		3.08	□□□□□ -1.92
RSC30	YHR056C	YCR024C-B	Q3E7Z8	88 aa		3.08	□□□□□ -1.92
RSC30	YHR056C	YOR020W-A	Q3E824	90 aa		3.08	□□□□□ -1.92
RSC30	YHR056C	GSP1	P32835	219 aa	Known RBP	3.07	□□□□□ -1.92
RSC30	YHR056C	YLR236C	A0A023PZG4	107 aa		3.07	□□□□□ -1.92
RSC30	YHR056C	Q0017	Q9ZZX8	53 aa		3.06	□□□□□ -1.92
RSC30	YHR056C	AIM11	P87275	137 aa		3.06	□□□□□ -1.92
RSC30	YHR056C	FYV12	Q08559	129 aa		3.06	□□□□□ -1.92
RSC30	YHR056C	YBR230W-A	Q3E762	66 aa		3.06	□□□□□ -1.92
RSC30	YHR056C	RPL18A	P0CX49	186 aa	Known RBP	3.04	□□□□□ -1.92
RSC30	YHR056C	RPL18B	P0CX50	186 aa	Known RBP	3.04	□□□□□ -1.92
RSC30	YHR056C	MET32	Q12041	191 aa		3.04	□□□□□ -1.92
RSC30	YHR056C	YJL127C-B	Q3E828	52 aa		3.04	□□□□□ -1.92
RSC30	YHR056C	YKR041W	P36134	250 aa		3.03	□□□□□ -1.92
RSC30	YHR056C	ICY1	Q04329	127 aa		3.03	□□□□□ -1.92
RSC30	YHR056C	HPA2	Q06592	156 aa		3.03	□□□□□ -1.92
RSC30	YHR056C	YOR072W	Q08486	104 aa		3.03	□□□□□ -1.92
RSC30	YHR056C	ATP14	Q12349	124 aa		3.03	□□□□□ -1.92
RSC30	YHR056C	PAU17	Q12370	124 aa		3.03	□□□□□ -1.92
RSC30	YHR056C	FMP16	Q12497	93 aa		3.03	□□□□□ -1.92
RSC30	YHR056C	BSC4	P53841	131 aa		3.02	□□□□□ -1.93
RSC30	YHR056C	FYV5	P25585	152 aa		3.02	□□□□□ -1.93
RSC30	YHR056C	YMR103C	Q04436	120 aa		3.02	□□□□□ -1.93
RSC30	YHR056C	YBR298C-A	Q8TGK4	73 aa		3.02	□□□□□ -1.93
RSC30	YHR056C	SFT1	P43682	97 aa		3.01	□□□□□ -1.93
RSC30	YHR056C	MRPS12	P53732	153 aa		3.01	□□□□□ -1.93
RSC30	YHR056C	YPL073C	P40323	161 aa		3.01	□□□□□ -1.93
RSC30	YHR056C	YBR027C	P38220	110 aa		3	□□□□□ -1.93
RSC30	YHR056C	MRPL11	P36521	249 aa	Predicted RBP	3	□□□□□ -1.93
RSC30	YHR056C	VMA21	P41806	77 aa		2.99	□□□□□ -1.93
RSC30	YHR056C	YEL067C	P39978	195 aa		2.98	□□□□□ -1.93
RSC30	YHR056C	RPS29A	P41057	56 aa	Known RBP	2.98	□□□□□ -1.93
RSC30	YHR056C	TIM11	P81449	96 aa	Predicted RBP	2.98	□□□□□ -1.93
RSC30	YHR056C	YHR007C-A	Q07074	71 aa		2.98	□□□□□ -1.93
RSC30	YHR056C	ATP5	P09457	212 aa		2.97	□□□□□ -1.93
RSC30	YHR056C	MSA2	P36157	363 aa		2.97	□□□□□ -1.93
RSC30	YHR056C	YKL069W	P36088	180 aa		2.97	□□□□□ -1.93
RSC30	YHR056C	YPL261C	Q08976	102 aa		2.97	□□□□□ -1.93
RSC30	YHR056C	ATG8	P38182	117 aa	RIP-Chip data	2.96	□□□□□ -1.93	not detected
RSC30	YHR056C	IRC21	Q04772	201 aa		2.96	□□□□□ -1.93
RSC30	YHR056C	GSP2	P32836	220 aa	Known RBP	2.96	□□□□□ -1.94
RSC30	YHR056C	POP3	P53833	195 aa	Predicted RBP	2.96	□□□□□ -1.94
RSC30	YHR056C	RGM1	Q00453	211 aa		2.96	□□□□□ -1.94
RSC30	YHR056C	YCR007C	P25354	239 aa		2.96	□□□□□ -1.94
RSC30	YHR056C	ARL3	Q02804	198 aa		2.96	□□□□□ -1.94
RSC30	YHR056C	SCS22	Q6Q595	175 aa		2.96	□□□□□ -1.94
RSC30	YHR056C	YLR050C	Q12155	161 aa	Known RBP	2.95	□□□□□ -1.94
RSC30	YHR056C	YOL097W-A	Q3E7Y9	61 aa		2.95	□□□□□ -1.94
RSC30	YHR056C	RPL36B	O14455	100 aa	Known RBP	2.95	□□□□□ -1.94
RSC30	YHR056C	YLR157W-D	P0CE99	70 aa		2.95	□□□□□ -1.94
RSC30	YHR056C	YNL184C	P53876	108 aa		2.95	□□□□□ -1.94
RSC30	YHR056C	IGO2	Q9P305	131 aa		2.95	□□□□□ -1.94
RSC30	YHR056C	CYT2	Q00873	224 aa		2.94	□□□□□ -1.94
RSC30	YHR056C	RPL28	P02406	149 aa	Known RBP	2.93	□□□□□ -1.94
RSC30	YHR056C	FUN14	P18411	198 aa		2.93	□□□□□ -1.94
RSC30	YHR056C	RPS29B	P41058	56 aa	Known RBP	2.93	□□□□□ -1.94
RSC30	YHR056C	YDR210W	Q03482	75 aa		2.93	□□□□□ -1.94
RSC30	YHR056C	BET1	P22804	142 aa		2.92	□□□□□ -1.94
RSC30	YHR056C	FYV4	P38783	130 aa	Predicted RBP	2.92	□□□□□ -1.94
RSC30	YHR056C	YIA6	P40556	373 aa		2.92	□□□□□ -1.94
RSC30	YHR056C	YMR230W-A	Q3E7B5	62 aa		2.92	□□□□□ -1.94
RSC30	YHR056C	NHP2	P32495	156 aa	Predicted RBP	2.91	□□□□□ -1.94
RSC30	YHR056C	YHR139C-A	O13536	103 aa		2.91	□□□□□ -1.94
RSC30	YHR056C	YKL044W	P36092	106 aa		2.91	□□□□□ -1.94
RSC30	YHR056C	PAU23	Q07987	124 aa		2.91	□□□□□ -1.94
RSC30	YHR056C	ZEO1	Q08245	113 aa		2.91	□□□□□ -1.94
RSC30	YHR056C	FYV7	Q12247	151 aa		2.9	□□□□□ -1.94
RSC30	YHR056C	OST2	P46964	130 aa		2.9	□□□□□ -1.95
RSC30	YHR056C	HHO1	P53551	258 aa		2.89	□□□□□ -1.95
RSC30	YHR056C	YDL022C-A	P0C5L6	82 aa		2.89	□□□□□ -1.95
RSC30	YHR056C	YAR1	P46683	200 aa		2.88	□□□□□ -1.95
RSC30	YHR056C	SHH4	Q06236	168 aa		2.88	□□□□□ -1.95
RSC30	YHR056C	YER134C	P40081	178 aa		2.86	□□□□□ -1.95
RSC30	YHR056C	TDA8	Q6B2U8	126 aa		2.85	□□□□□ -1.95
RSC30	YHR056C	CNL1	Q06333	122 aa		2.85	□□□□□ -1.95
RSC30	YHR056C	YDL157C	Q12082	118 aa		2.85	□□□□□ -1.95

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms