RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W MDH2P22133 377 aa4.37□□□□□ -1.71
SNU71YGR013W YBR209WP38311 105 aa4.37□□□□□ -1.71
SNU71YGR013W COX12Q01519 83 aa4.37□□□□□ -1.71
SNU71YGR013W YMR175W-AQ3E766 64 aa4.37□□□□□ -1.71
SNU71YGR013W YSF3P0C074 85 aaPredicted RBP4.36□□□□□ -1.71
SNU71YGR013W RSM19P53733 91 aaPredicted RBP4.35□□□□□ -1.71
SNU71YGR013W EMC6Q12431 108 aa4.35□□□□□ -1.71
SNU71YGR013W YPL038W-AQ3E7B4 63 aa4.35□□□□□ -1.71
SNU71YGR013W SNF11P38956 169 aa4.35□□□□□ -1.71
SNU71YGR013W YDR042CQ03205 200 aa4.35□□□□□ -1.71
SNU71YGR013W MIC10Q96VH5 97 aa4.35□□□□□ -1.71
SNU71YGR013W PAU1P0CE88 120 aa4.34□□□□□ -1.71
SNU71YGR013W PAU14P0CE89 120 aa4.34□□□□□ -1.71
SNU71YGR013W PAU6P0CE90 120 aa4.34□□□□□ -1.71
SNU71YGR013W PAU18P0CE91 120 aa4.34□□□□□ -1.71
SNU71YGR013W PAU8P0CE92 120 aa4.34□□□□□ -1.71
SNU71YGR013W PAU11P0CE93 120 aa4.34□□□□□ -1.71
SNU71YGR013W TIM12P32830 109 aa4.34□□□□□ -1.71
SNU71YGR013W PAU13P38725 120 aa4.34□□□□□ -1.71
SNU71YGR013W NCE101Q02820 53 aa4.34□□□□□ -1.71
SNU71YGR013W PAU10Q03050 120 aa4.34□□□□□ -1.71
SNU71YGR013W PAU20Q08322 120 aa4.34□□□□□ -1.71
SNU71YGR013W PAU9Q3E770 120 aa4.34□□□□□ -1.71
SNU71YGR013W PAU4P53427 120 aa4.33□□□□□ -1.72
SNU71YGR013W PAU24P38155 120 aa4.32□□□□□ -1.72
SNU71YGR013W YDL241WQ07738 123 aa4.32□□□□□ -1.72
SNU71YGR013W YOR105WQ08504 108 aa4.32□□□□□ -1.72
SNU71YGR013W FAS1P07149 2051 aaKnown RBP4.32□□□□□ -1.72
SNU71YGR013W HSP150P32478 413 aa4.32□□□□□ -1.72
SNU71YGR013W RPS22BQ3E7Y3 130 aaKnown RBP4.32□□□□□ -1.72
SNU71YGR013W YOR376W-AQ3E805 51 aa4.32□□□□□ -1.72
SNU71YGR013W RRT15Q3E811 62 aa4.32□□□□□ -1.72
SNU71YGR013W YDR381C-AQ3E6R5 114 aa4.31□□□□□ -1.72
SNU71YGR013W YEL067CP39978 195 aa4.3□□□□□ -1.72
SNU71YGR013W SPG1P50088 95 aa4.3□□□□□ -1.72
SNU71YGR013W PAU12P53343 120 aa4.3□□□□□ -1.72
SNU71YGR013W MIX14Q04341 121 aa4.3□□□□□ -1.72
SNU71YGR013W PAU2P32612 120 aa4.3□□□□□ -1.72
SNU71YGR013W YHP1Q04116 353 aa4.3□□□□□ -1.72
SNU71YGR013W UTP20P35194 2493 aaKnown RBP4.28□□□□□ -1.72
SNU71YGR013W YHR022CP38763 256 aa4.28□□□□□ -1.72
SNU71YGR013W YFR035CP43608 114 aa4.28□□□□□ -1.72
SNU71YGR013W DAD4P69851 72 aa4.28□□□□□ -1.72
SNU71YGR013W VPS55P47111 140 aa4.28□□□□□ -1.72
SNU71YGR013W MIX17Q03667 156 aa4.28□□□□□ -1.72
SNU71YGR013W LSM6Q06406 86 aaKnown RBP4.28□□□□□ -1.72
SNU71YGR013W COX8P04039 78 aa4.27□□□□□ -1.73
SNU71YGR013W YAL064WP39711 94 aa4.27□□□□□ -1.73
SNU71YGR013W YOR343CQ12484 108 aa4.27□□□□□ -1.73
SNU71YGR013W YLR365WQ7LIF2 110 aa4.27□□□□□ -1.73
SNU71YGR013W MRPL31P14063 131 aaPredicted RBP4.26□□□□□ -1.73
SNU71YGR013W IRC19Q07843 230 aa4.26□□□□□ -1.73
SNU71YGR013W YHR213WP0CI67 198 aa4.25□□□□□ -1.73
SNU71YGR013W TDA2P40045 126 aa4.25□□□□□ -1.73
SNU71YGR013W YKL044WP36092 106 aa4.24□□□□□ -1.73
SNU71YGR013W YER187WP40102 141 aa4.24□□□□□ -1.73
SNU71YGR013W YJL144WP47009 104 aa4.24□□□□□ -1.73
SNU71YGR013W ATP19P81451 68 aa4.24□□□□□ -1.73
SNU71YGR013W FIT2Q08906 153 aa4.24□□□□□ -1.73
SNU71YGR013W COX9P07255 59 aa4.24□□□□□ -1.73
SNU71YGR013W RPL43AP0CX25 92 aaKnown RBP4.24□□□□□ -1.73
SNU71YGR013W RPL43BP0CX26 92 aa4.24□□□□□ -1.73
SNU71YGR013W YKR045CP36138 183 aa4.24□□□□□ -1.73
SNU71YGR013W YGR269WP40326 108 aa4.24□□□□□ -1.73
SNU71YGR013W BRP1P53194 125 aa4.24□□□□□ -1.73
SNU71YGR013W ICY1Q04329 127 aa4.24□□□□□ -1.73
SNU71YGR013W YHR214C-DP0CX93 97 aa4.23□□□□□ -1.73
SNU71YGR013W YIL014C-AQ02598 104 aa4.23□□□□□ -1.73
SNU71YGR013W FPR2P32472 135 aa4.22□□□□□ -1.73
SNU71YGR013W RSM18P40033 138 aa4.22□□□□□ -1.73
SNU71YGR013W YDL012CQ12489 107 aa4.22□□□□□ -1.73
SNU71YGR013W ICS3P47034 131 aa4.22□□□□□ -1.73
SNU71YGR013W BLM10P43583 2143 aa4.21□□□□□ -1.74
SNU71YGR013W RPS22AP0C0W1 130 aaKnown RBP4.21□□□□□ -1.74
SNU71YGR013W HUR1P45820 110 aa4.21□□□□□ -1.74
SNU71YGR013W YSY6P38374 65 aa4.2□□□□□ -1.74
SNU71YGR013W SOM1Q05676 74 aa4.2□□□□□ -1.74
SNU71YGR013W SEC16P48415 2195 aaKnown RBP4.2□□□□□ -1.74
SNU71YGR013W YPL261CQ08976 102 aa4.2□□□□□ -1.74
SNU71YGR013W FLO9P39712 1322 aa4.19□□□□□ -1.74
SNU71YGR013W DSE2P38844 325 aa4.19□□□□□ -1.74
SNU71YGR013W YOR032W-AQ8TGS1 66 aa4.19□□□□□ -1.74
SNU71YGR013W ROX3P25046 220 aa4.17□□□□□ -1.74
SNU71YGR013W FYV5P25585 152 aa4.17□□□□□ -1.74
SNU71YGR013W PRM7Q12459 698 aa4.17□□□□□ -1.74
SNU71YGR013W YHR173CP38864 112 aa4.16□□□□□ -1.74
SNU71YGR013W COA2Q3E823 68 aa4.16□□□□□ -1.74
SNU71YGR013W QCR10P37299 77 aa4.15□□□□□ -1.74
SNU71YGR013W LST8P41318 303 aa4.15□□□□□ -1.74
SNU71YGR013W GIS2P53849 153 aaKnown RBP RIP-Chip data4.15□□□□□ -1.74not detected
SNU71YGR013W YHL005CP38752 130 aa4.15□□□□□ -1.75
SNU71YGR013W PFY1P07274 126 aa4.14□□□□□ -1.75
SNU71YGR013W CDC39P25655 2108 aaKnown RBP4.14□□□□□ -1.75
SNU71YGR013W YFL051CP43552 160 aa4.13□□□□□ -1.75
SNU71YGR013W AIM4P38305 123 aaPredicted RBP4.13□□□□□ -1.75
SNU71YGR013W YOL118CQ08259 102 aa4.12□□□□□ -1.75
SNU71YGR013W YOR314WQ12506 109 aa4.12□□□□□ -1.75
SNU71YGR013W YDR246W-AQ3E763 66 aa4.12□□□□□ -1.75
SNU71YGR013W YAL065CO13511 128 aa4.11□□□□□ -1.75
SNU71YGR013W QCR9P22289 66 aa4.11□□□□□ -1.75
Retrieved 100 of 5,963 RNA–protein pairs in 224.2 ms