RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C QCR8P08525 94 aa2.73□□□□□ -1.97
CDC9YDL164C PAU1P0CE88 120 aa2.73□□□□□ -1.97
CDC9YDL164C PAU14P0CE89 120 aa2.73□□□□□ -1.97
CDC9YDL164C PAU6P0CE90 120 aa2.73□□□□□ -1.97
CDC9YDL164C PAU18P0CE91 120 aa2.73□□□□□ -1.97
CDC9YDL164C PAU8P0CE92 120 aa2.73□□□□□ -1.97
CDC9YDL164C PAU11P0CE93 120 aa2.73□□□□□ -1.97
CDC9YDL164C PAU13P38725 120 aa2.73□□□□□ -1.97
CDC9YDL164C YNL198CP40166 100 aa2.73□□□□□ -1.97
CDC9YDL164C PAU4P53427 120 aa2.73□□□□□ -1.97
CDC9YDL164C PAU10Q03050 120 aa2.73□□□□□ -1.97
CDC9YDL164C PAU20Q08322 120 aa2.73□□□□□ -1.97
CDC9YDL164C YDL012CQ12489 107 aa2.73□□□□□ -1.97
CDC9YDL164C PAU9Q3E770 120 aa2.73□□□□□ -1.97
CDC9YDL164C CWP2P43497 92 aa2.73□□□□□ -1.97
CDC9YDL164C HMRA2P0CY13 119 aa2.72□□□□□ -1.97
CDC9YDL164C PRM3Q08931 133 aa2.72□□□□□ -1.97
CDC9YDL164C YLR363W-AQ3E747 85 aa2.71□□□□□ -1.98
CDC9YDL164C YLR285C-AQ3E771 56 aa2.71□□□□□ -1.98
CDC9YDL164C ECM12O13529 151 aa2.71□□□□□ -1.98
CDC9YDL164C RPS22AP0C0W1 130 aaKnown RBP2.7□□□□□ -1.98
CDC9YDL164C YGL014C-AP0C5N1 53 aa2.7□□□□□ -1.98
CDC9YDL164C SRX1P36077 127 aa2.7□□□□□ -1.98
CDC9YDL164C YHR138CP38841 114 aaPredicted RBP2.7□□□□□ -1.98
CDC9YDL164C DSE2P38844 325 aa2.7□□□□□ -1.98
CDC9YDL164C YDR042CQ03205 200 aa2.7□□□□□ -1.98
CDC9YDL164C YIL102C-AQ2V2P5 75 aa2.7□□□□□ -1.98
CDC9YDL164C YHR213WP0CI67 198 aa2.7□□□□□ -1.98
CDC9YDL164C YFL065CP43539 102 aa2.69□□□□□ -1.98
CDC9YDL164C RGM1Q00453 211 aa2.69□□□□□ -1.98
CDC9YDL164C MIX14Q04341 121 aa2.69□□□□□ -1.98
CDC9YDL164C YPR203WQ08994 102 aa2.69□□□□□ -1.98
CDC9YDL164C COA2Q3E823 68 aa2.69□□□□□ -1.98
CDC9YDL164C YOR105WQ08504 108 aa2.68□□□□□ -1.98
CDC9YDL164C YJL197C-AP0C5P0 93 aa2.67□□□□□ -1.98
CDC9YDL164C MIC27P50945 234 aa2.67□□□□□ -1.98
CDC9YDL164C YMR321CQ04898 105 aa2.67□□□□□ -1.98
CDC9YDL164C HPA2Q06592 156 aa2.67□□□□□ -1.98
CDC9YDL164C RPS22BQ3E7Y3 130 aaKnown RBP2.67□□□□□ -1.98
CDC9YDL164C RPL36BO14455 100 aaKnown RBP2.67□□□□□ -1.98
CDC9YDL164C RPL36AP05745 100 aaPredicted RBP2.67□□□□□ -1.98
CDC9YDL164C ATX1P38636 73 aa2.67□□□□□ -1.98
CDC9YDL164C MIX17Q03667 156 aa2.67□□□□□ -1.98
CDC9YDL164C CYB5P40312 120 aa2.66□□□□□ -1.98
CDC9YDL164C POC4Q12245 148 aaPredicted RBP2.66□□□□□ -1.98
CDC9YDL164C FLO9P39712 1322 aa2.65□□□□□ -1.98
CDC9YDL164C YBR027CP38220 110 aa2.65□□□□□ -1.99
CDC9YDL164C YLR162WQ06235 118 aa2.65□□□□□ -1.99
CDC9YDL164C TIM12P32830 109 aa2.65□□□□□ -1.99
CDC9YDL164C YHR007C-AQ07074 71 aa2.65□□□□□ -1.99
CDC9YDL164C YKL023C-AQ2V2P3 75 aa2.65□□□□□ -1.99
CDC9YDL164C QCR9P22289 66 aa2.64□□□□□ -1.99
CDC9YDL164C ICY1Q04329 127 aa2.63□□□□□ -1.99
CDC9YDL164C VAM10Q08474 114 aa2.63□□□□□ -1.99
CDC9YDL164C NHP2P32495 156 aaPredicted RBP2.62□□□□□ -1.99
CDC9YDL164C LST8P41318 303 aa2.62□□□□□ -1.99
CDC9YDL164C ROX3P25046 220 aa2.62□□□□□ -1.99
CDC9YDL164C YIL163CP40448 117 aa2.62□□□□□ -1.99
CDC9YDL164C YHR086W-AQ3E746 53 aa2.62□□□□□ -1.99
CDC9YDL164C YMR175W-AQ3E766 64 aa2.62□□□□□ -1.99
CDC9YDL164C ENV10Q99382 181 aa2.62□□□□□ -1.99
CDC9YDL164C RPL33AP05744 107 aaKnown RBP2.61□□□□□ -1.99
CDC9YDL164C YBR219CP38317 127 aa2.61□□□□□ -1.99
CDC9YDL164C YMR007WQ03675 126 aa2.61□□□□□ -1.99
CDC9YDL164C COA3Q3E7B2 85 aa2.61□□□□□ -1.99
CDC9YDL164C YCL042WP25572 119 aa2.61□□□□□ -1.99
CDC9YDL164C SPC1P46965 94 aa2.61□□□□□ -1.99
CDC9YDL164C IMP2P46972 177 aa2.61□□□□□ -1.99
CDC9YDL164C POR2P40478 281 aa2.6□□□□□ -1.99
CDC9YDL164C YPR108W-AQ3E7B3 70 aa2.6□□□□□ -1.99
CDC9YDL164C HUG1Q6Q5K6 68 aa2.6□□□□□ -1.99
CDC9YDL164C RPA12P32529 125 aaKnown RBP2.59□□□□□ -1.99
CDC9YDL164C YMR122CQ03879 124 aa2.59□□□□□ -1.99
CDC9YDL164C YCR085WP25650 117 aa2.59□□□□□ -1.99
CDC9YDL164C YDR119W-AQ2V2P9 66 aa2.59□□□□□ -1.99
CDC9YDL164C YFL041W-AQ3E817 63 aa2.59□□□□□ -1.99
CDC9YDL164C BPH1P25356 2167 aa2.59□□□□□ -2
CDC9YDL164C YSF3P0C074 85 aaPredicted RBP2.58□□□□□ -2
CDC9YDL164C SED1Q01589 338 aa2.58□□□□□ -2
CDC9YDL164C RSM18P40033 138 aa2.58□□□□□ -2
CDC9YDL164C ICS3P47034 131 aa2.58□□□□□ -2
CDC9YDL164C LSM6Q06406 86 aaKnown RBP2.58□□□□□ -2
CDC9YDL164C PRM7Q12459 698 aa2.57□□□□□ -2
CDC9YDL164C HFA1P32874 2273 aa2.57□□□□□ -2
CDC9YDL164C NRG2P38082 220 aa2.57□□□□□ -2
CDC9YDL164C MRPS12P53732 153 aa2.57□□□□□ -2
CDC9YDL164C COX12Q01519 83 aa2.57□□□□□ -2
CDC9YDL164C CCW12Q12127 133 aa2.57□□□□□ -2
CDC9YDL164C MRPL38P35996 138 aaPredicted RBP2.56□□□□□ -2
CDC9YDL164C YHR173CP38864 112 aa2.56□□□□□ -2
CDC9YDL164C YOR343CQ12484 108 aa2.55□□□□□ -2
CDC9YDL164C AQY2P0CD90 149 aa2.54□□□□□ -2
CDC9YDL164C MRPL31P14063 131 aaPredicted RBP2.54□□□□□ -2
CDC9YDL164C PAU7P39545 55 aa2.54□□□□□ -2
CDC9YDL164C YCR095W-AQ3E787 52 aa2.54□□□□□ -2
CDC9YDL164C BEM2P39960 2167 aaKnown RBP2.54□□□□□ -2
CDC9YDL164C BLM10P43583 2143 aa2.54□□□□□ -2
CDC9YDL164C VPS55P47111 140 aa2.54□□□□□ -2
CDC9YDL164C YOL118CQ08259 102 aa2.54□□□□□ -2
CDC9YDL164C TOM6P33448 61 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 126.2 ms