RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	YKL069W	P36088	180 aa		2.67	□□□□□ -1.98
SAF1	YBR280C	ATG8	P38182	117 aa	RIP-Chip data	2.67	□□□□□ -1.98	not detected
SAF1	YBR280C	GTT1	P40582	234 aa		2.67	□□□□□ -1.98
SAF1	YBR280C	YLR112W	Q12130	139 aa		2.67	□□□□□ -1.98
SAF1	YBR280C	YKL023C-A	Q2V2P3	75 aa		2.67	□□□□□ -1.98
SAF1	YBR280C	GSP1	P32835	219 aa	Known RBP	2.66	□□□□□ -1.98
SAF1	YBR280C	AIM11	P87275	137 aa		2.66	□□□□□ -1.98
SAF1	YBR280C	MBF1	O14467	151 aa	Known RBP	2.66	□□□□□ -1.98
SAF1	YBR280C	RPL18A	P0CX49	186 aa	Known RBP	2.66	□□□□□ -1.98
SAF1	YBR280C	RPL18B	P0CX50	186 aa	Known RBP	2.66	□□□□□ -1.98
SAF1	YBR280C	KRE1	P17260	313 aa		2.66	□□□□□ -1.98
SAF1	YBR280C	HOT13	P36078	116 aa		2.66	□□□□□ -1.98
SAF1	YBR280C	YGL118C	P53132	145 aa		2.66	□□□□□ -1.98
SAF1	YBR280C	DDR2	P89113	61 aa		2.66	□□□□□ -1.98
SAF1	YBR280C	YML079W	Q03629	201 aa		2.66	□□□□□ -1.98
SAF1	YBR280C	YGR121W-A	Q3E816	71 aa		2.66	□□□□□ -1.98
SAF1	YBR280C	HTL1	Q9URQ5	78 aa		2.66	□□□□□ -1.98
SAF1	YBR280C	YLL006W-A	Q3E814	58 aa		2.65	□□□□□ -1.99
SAF1	YBR280C	YMR103C	Q04436	120 aa		2.64	□□□□□ -1.99
SAF1	YBR280C	MRPL24	P36525	258 aa	Predicted RBP	2.64	□□□□□ -1.99
SAF1	YBR280C	PEX17	P40155	199 aa		2.64	□□□□□ -1.99
SAF1	YBR280C	RPL29	P05747	59 aa	Predicted RBP	2.63	□□□□□ -1.99
SAF1	YBR280C	QCR8	P08525	94 aa		2.63	□□□□□ -1.99
SAF1	YBR280C	RPL27B	P0C2H7	136 aa	Known RBP	2.63	□□□□□ -1.99
SAF1	YBR280C	GSP2	P32836	220 aa	Known RBP	2.63	□□□□□ -1.99
SAF1	YBR280C	YPL257W	Q08974	193 aa		2.63	□□□□□ -1.99
SAF1	YBR280C	COX10	P21592	462 aa		2.62	□□□□□ -1.99
SAF1	YBR280C	YNL162W-A	Q3E7A8	72 aa		2.62	□□□□□ -1.99
SAF1	YBR280C	RPL37B	P51402	88 aa	Known RBP	2.62	□□□□□ -1.99
SAF1	YBR280C	POP3	P53833	195 aa	Predicted RBP	2.62	□□□□□ -1.99
SAF1	YBR280C	HAP3	P13434	144 aa		2.61	□□□□□ -1.99
SAF1	YBR280C	SPT4	P32914	102 aa	Predicted RBP	2.61	□□□□□ -1.99
SAF1	YBR280C	CYT2	Q00873	224 aa		2.61	□□□□□ -1.99
SAF1	YBR280C	YAL063C-A	Q3E791	96 aa		2.61	□□□□□ -1.99
SAF1	YBR280C	YNL042W-B	Q3E7Z2	85 aa		2.61	□□□□□ -1.99
SAF1	YBR280C	YDL022C-A	P0C5L6	82 aa		2.6	□□□□□ -1.99
SAF1	YBR280C	MRPL11	P36521	249 aa	Predicted RBP	2.6	□□□□□ -1.99
SAF1	YBR280C	NSE4	P43124	402 aa		2.6	□□□□□ -1.99
SAF1	YBR280C	YNL190W	P53872	204 aa		2.6	□□□□□ -1.99
SAF1	YBR280C	YPL261C	Q08976	102 aa		2.6	□□□□□ -1.99
SAF1	YBR280C	YOR020W-A	Q3E824	90 aa		2.6	□□□□□ -1.99
SAF1	YBR280C	RPL28	P02406	149 aa	Known RBP	2.6	□□□□□ -1.99
SAF1	YBR280C	FYV4	P38783	130 aa	Predicted RBP	2.6	□□□□□ -1.99
SAF1	YBR280C	UBC11	P52492	156 aa		2.6	□□□□□ -1.99
SAF1	YBR280C	MRPS12	P53732	153 aa		2.6	□□□□□ -1.99
SAF1	YBR280C	HPA2	Q06592	156 aa		2.6	□□□□□ -1.99
SAF1	YBR280C	RPL26A	P05743	127 aa	Known RBP	2.59	□□□□□ -1.99
SAF1	YBR280C	YER134C	P40081	178 aa		2.59	□□□□□ -1.99
SAF1	YBR280C	YPL073C	P40323	161 aa		2.59	□□□□□ -1.99
SAF1	YBR280C	LSM8	P47093	109 aa	Known RBP	2.59	□□□□□ -1.99
SAF1	YBR280C	CGR1	P53188	120 aa		2.59	□□□□□ -1.99
SAF1	YBR280C	RPL26B	P53221	127 aa	Known RBP	2.59	□□□□□ -1.99
SAF1	YBR280C	COA6	Q3E846	104 aa		2.59	□□□□□ -1.99
SAF1	YBR280C	BSC4	P53841	131 aa		2.58	□□□□□ -2
SAF1	YBR280C	YMR230W-A	Q3E7B5	62 aa		2.58	□□□□□ -2
SAF1	YBR280C	YCR007C	P25354	239 aa		2.58	□□□□□ -2
SAF1	YBR280C	YKR041W	P36134	250 aa		2.58	□□□□□ -2
SAF1	YBR280C	YHL018W	P38744	120 aa	Predicted RBP	2.58	□□□□□ -2
SAF1	YBR280C	CUE4	Q04201	117 aa	Predicted RBP	2.58	□□□□□ -2
SAF1	YBR280C	SSS1	P35179	80 aa		2.57	□□□□□ -2
SAF1	YBR280C	YBR027C	P38220	110 aa		2.57	□□□□□ -2
SAF1	YBR280C	YBR230W-A	Q3E762	66 aa		2.57	□□□□□ -2
SAF1	YBR280C	LSO2	Q3E772	92 aa	Known RBP	2.57	□□□□□ -2
SAF1	YBR280C	YJL127C-B	Q3E828	52 aa		2.57	□□□□□ -2
SAF1	YBR280C	ATP5	P09457	212 aa		2.56	□□□□□ -2
SAF1	YBR280C	UGX2	P32772	223 aa		2.56	□□□□□ -2
SAF1	YBR280C	YHR007C-A	Q07074	71 aa		2.56	□□□□□ -2
SAF1	YBR280C	ARL3	Q02804	198 aa		2.55	□□□□□ -2
SAF1	YBR280C	YOR072W	Q08486	104 aa		2.54	□□□□□ -2
SAF1	YBR280C	PAU17	Q12370	124 aa		2.54	□□□□□ -2
SAF1	YBR280C	YHL005C	P38752	130 aa		2.54	□□□□□ -2
SAF1	YBR280C	FYV5	P25585	152 aa		2.53	□□□□□ -2
SAF1	YBR280C	IRC21	Q04772	201 aa		2.53	□□□□□ -2
SAF1	YBR280C	FYV7	Q12247	151 aa		2.53	□□□□□ -2
SAF1	YBR280C	TMA7	Q3E764	64 aa	Known RBP	2.53	□□□□□ -2
SAF1	YBR280C	YLR236C	A0A023PZG4	107 aa		2.52	□□□□□ -2.01
SAF1	YBR280C	MRPL44	P19956	98 aa		2.52	□□□□□ -2.01
SAF1	YBR280C	YEL067C	P39978	195 aa		2.52	□□□□□ -2.01
SAF1	YBR280C	YNL122C	P53921	115 aa	Predicted RBP	2.52	□□□□□ -2.01
SAF1	YBR280C	ICY1	Q04329	127 aa		2.52	□□□□□ -2.01
SAF1	YBR280C	IGO2	Q9P305	131 aa		2.52	□□□□□ -2.01
SAF1	YBR280C	MID2	P36027	376 aa		2.51	□□□□□ -2.01
SAF1	YBR280C	YIA6	P40556	373 aa		2.51	□□□□□ -2.01
SAF1	YBR280C	CNL1	Q06333	122 aa		2.51	□□□□□ -2.01
SAF1	YBR280C	YLR050C	Q12155	161 aa	Known RBP	2.5	□□□□□ -2.01
SAF1	YBR280C	YIL134C-A	Q45U18	67 aa		2.5	□□□□□ -2.01
SAF1	YBR280C	SCS22	Q6Q595	175 aa		2.5	□□□□□ -2.01
SAF1	YBR280C	YHR139C-A	O13536	103 aa		2.5	□□□□□ -2.01
SAF1	YBR280C	FUN14	P18411	198 aa		2.5	□□□□□ -2.01
SAF1	YBR280C	RGM1	Q00453	211 aa		2.5	□□□□□ -2.01
SAF1	YBR280C	YDL085C-A	Q3E7B7	68 aa	Known RBP	2.5	□□□□□ -2.01
SAF1	YBR280C	RPL36B	O14455	100 aa	Known RBP	2.49	□□□□□ -2.01
SAF1	YBR280C	COX7	P10174	60 aa		2.49	□□□□□ -2.01
SAF1	YBR280C	BET1	P22804	142 aa		2.49	□□□□□ -2.01
SAF1	YBR280C	YNR077C	P53758	84 aa		2.49	□□□□□ -2.01
SAF1	YBR280C	YCR043C	P25361	127 aa		2.48	□□□□□ -2.01
SAF1	YBR280C	YNL184C	P53876	108 aa		2.48	□□□□□ -2.01
SAF1	YBR280C	SAE3	P89114	91 aa		2.48	□□□□□ -2.01
SAF1	YBR280C	SEN15	Q04675	128 aa		2.48	□□□□□ -2.01
SAF1	YBR280C	YEL045C	P32616	141 aa		2.48	□□□□□ -2.01

Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms