RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C ATP16Q12165 160 aa4.26□□□□□ -1.73
LDB7YBL006C MBF1O14467 151 aaKnown RBP4.24□□□□□ -1.73
LDB7YBL006C KNH1P50112 268 aa4.24□□□□□ -1.73
LDB7YBL006C QCR8P08525 94 aa4.23□□□□□ -1.73
LDB7YBL006C MRPL33P20084 86 aa4.23□□□□□ -1.73
LDB7YBL006C MRPS12P53732 153 aa4.23□□□□□ -1.73
LDB7YBL006C YKL023C-AQ2V2P3 75 aa4.23□□□□□ -1.73
LDB7YBL006C YLL006W-AQ3E814 58 aa4.23□□□□□ -1.73
LDB7YBL006C YKR041WP36134 250 aa4.22□□□□□ -1.73
LDB7YBL006C ARL3Q02804 198 aa4.22□□□□□ -1.73
LDB7YBL006C YOR268CQ08734 132 aa4.22□□□□□ -1.73
LDB7YBL006C YPL261CQ08976 102 aa4.22□□□□□ -1.73
LDB7YBL006C RPL28P02406 149 aaKnown RBP4.21□□□□□ -1.74
LDB7YBL006C RPL29P05747 59 aaPredicted RBP4.21□□□□□ -1.74
LDB7YBL006C CPR1P14832 162 aaKnown RBP4.21□□□□□ -1.74
LDB7YBL006C EDC2P40023 145 aaPredicted RBP4.21□□□□□ -1.74
LDB7YBL006C UBC4P15731 148 aa4.2□□□□□ -1.74
LDB7YBL006C UBC11P52492 156 aa4.2□□□□□ -1.74
LDB7YBL006C YNL162W-AQ3E7A8 72 aa4.2□□□□□ -1.74
LDB7YBL006C HAP3P13434 144 aa4.19□□□□□ -1.74
LDB7YBL006C CDC43P18898 376 aa4.19□□□□□ -1.74
LDB7YBL006C SCM4P32564 187 aa4.19□□□□□ -1.74
LDB7YBL006C YEL067CP39978 195 aa4.19□□□□□ -1.74
LDB7YBL006C YML079WQ03629 201 aa4.19□□□□□ -1.74
LDB7YBL006C YER039C-AP0CD97 72 aa4.18□□□□□ -1.74
LDB7YBL006C ARO2P28777 376 aaKnown RBP4.18□□□□□ -1.74
LDB7YBL006C MRPL11P36521 249 aaPredicted RBP4.18□□□□□ -1.74
LDB7YBL006C YNL190WP53872 204 aa4.18□□□□□ -1.74
LDB7YBL006C YLR050CQ12155 161 aaKnown RBP4.18□□□□□ -1.74
LDB7YBL006C YJR085CP47131 105 aaKnown RBP4.16□□□□□ -1.74
LDB7YBL006C SPG1P50088 95 aa4.16□□□□□ -1.74
LDB7YBL006C HPA2Q06592 156 aa4.15□□□□□ -1.75
LDB7YBL006C SCS22Q6Q595 175 aa4.15□□□□□ -1.75
LDB7YBL006C UGX2P32772 223 aa4.14□□□□□ -1.75
LDB7YBL006C YNR077CP53758 84 aa4.14□□□□□ -1.75
LDB7YBL006C DDR2P89113 61 aa4.14□□□□□ -1.75
LDB7YBL006C CNL1Q06333 122 aa4.14□□□□□ -1.75
LDB7YBL006C YPL257WQ08974 193 aa4.14□□□□□ -1.75
LDB7YBL006C YNL042W-BQ3E7Z2 85 aa4.14□□□□□ -1.75
LDB7YBL006C YGR121W-AQ3E816 71 aa4.14□□□□□ -1.75
LDB7YBL006C YKL044WP36092 106 aa4.13□□□□□ -1.75
LDB7YBL006C CUE4Q04201 117 aaPredicted RBP4.13□□□□□ -1.75
LDB7YBL006C IGO2Q9P305 131 aa4.13□□□□□ -1.75
LDB7YBL006C SEC11P15367 167 aa4.12□□□□□ -1.75
LDB7YBL006C KRE1P17260 313 aa4.12□□□□□ -1.75
LDB7YBL006C YOR020W-AQ3E824 90 aa4.12□□□□□ -1.75
LDB7YBL006C ATP5P09457 212 aa4.11□□□□□ -1.75
LDB7YBL006C MRPL44P19956 98 aa4.11□□□□□ -1.75
LDB7YBL006C SPT4P32914 102 aaPredicted RBP4.11□□□□□ -1.75
LDB7YBL006C YPL073CP40323 161 aa4.11□□□□□ -1.75
LDB7YBL006C YBR230W-AQ3E762 66 aa4.11□□□□□ -1.75
LDB7YBL006C RPL26AP05743 127 aaKnown RBP4.1□□□□□ -1.75
LDB7YBL006C YCR007CP25354 239 aa4.1□□□□□ -1.75
LDB7YBL006C RPL26BP53221 127 aaKnown RBP4.1□□□□□ -1.75
LDB7YBL006C SEN15Q04675 128 aa4.1□□□□□ -1.75
LDB7YBL006C CMC4Q3E7A9 73 aa4.1□□□□□ -1.75
LDB7YBL006C KTI11Q3E840 82 aa4.1□□□□□ -1.75
LDB7YBL006C YIL134C-AQ45U18 67 aa4.1□□□□□ -1.75
LDB7YBL006C SSS1P35179 80 aa4.09□□□□□ -1.75
LDB7YBL006C MID2P36027 376 aa4.08□□□□□ -1.76
LDB7YBL006C YGL230CP53074 147 aa4.08□□□□□ -1.76
LDB7YBL006C YJL127C-BQ3E828 52 aa4.08□□□□□ -1.76
LDB7YBL006C YIA6P40556 373 aa4.07□□□□□ -1.76
LDB7YBL006C RGM1Q00453 211 aa4.07□□□□□ -1.76
LDB7YBL006C ICY1Q04329 127 aa4.07□□□□□ -1.76
LDB7YBL006C IRC21Q04772 201 aa4.07□□□□□ -1.76
LDB7YBL006C PAU17Q12370 124 aa4.07□□□□□ -1.76
LDB7YBL006C KSH1Q8TGJ3 72 aa4.07□□□□□ -1.76
LDB7YBL006C YFR057WP43625 151 aa4.06□□□□□ -1.76
LDB7YBL006C COX10P21592 462 aa4.05□□□□□ -1.76
LDB7YBL006C HOT13P36078 116 aa4.05□□□□□ -1.76
LDB7YBL006C MSL1P40567 111 aaPredicted RBP4.05□□□□□ -1.76
LDB7YBL006C BSC4P53841 131 aa4.05□□□□□ -1.76
LDB7YBL006C YMR230W-AQ3E7B5 62 aa4.05□□□□□ -1.76
LDB7YBL006C FYV5P25585 152 aa4.04□□□□□ -1.76
LDB7YBL006C COA6Q3E846 104 aa4.03□□□□□ -1.76
LDB7YBL006C MRPL24P36525 258 aaPredicted RBP4.02□□□□□ -1.77
LDB7YBL006C YML108WQ03759 105 aa4.02□□□□□ -1.77
LDB7YBL006C YHR007C-AQ07074 71 aa4.02□□□□□ -1.77
LDB7YBL006C DUT1P33317 147 aa4.01□□□□□ -1.77
LDB7YBL006C YBR027CP38220 110 aa4.01□□□□□ -1.77
LDB7YBL006C YOR072WQ08486 104 aa4.01□□□□□ -1.77
LDB7YBL006C YDL157CQ12082 118 aa4.01□□□□□ -1.77
LDB7YBL006C YLR236CA0A023PZG4 107 aa4□□□□□ -1.77
LDB7YBL006C YOR034C-AQ3E735 80 aa4□□□□□ -1.77
LDB7YBL006C TIM11P81449 96 aaPredicted RBP3.99□□□□□ -1.77
LDB7YBL006C YHR130CP38834 111 aa3.96□□□□□ -1.78
LDB7YBL006C RPL37BP51402 88 aaKnown RBP3.96□□□□□ -1.78
LDB7YBL006C YAL063C-AQ3E791 96 aa3.96□□□□□ -1.78
LDB7YBL006C RPL36BO14455 100 aaKnown RBP3.95□□□□□ -1.78
LDB7YBL006C PAU23Q07987 124 aa3.95□□□□□ -1.78
LDB7YBL006C BET1P22804 142 aa3.94□□□□□ -1.78
LDB7YBL006C CGR1P53188 120 aa3.94□□□□□ -1.78
LDB7YBL006C YNL184CP53876 108 aa3.94□□□□□ -1.78
LDB7YBL006C NAT5Q08689 176 aa3.94□□□□□ -1.78
LDB7YBL006C MSA2P36157 363 aa3.93□□□□□ -1.78
LDB7YBL006C YHR139C-AO13536 103 aa3.92□□□□□ -1.78
LDB7YBL006C YHL018WP38744 120 aaPredicted RBP3.92□□□□□ -1.78
LDB7YBL006C MPC3P53311 146 aa3.92□□□□□ -1.78
LDB7YBL006C ELC1Q03071 99 aa3.92□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms