RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 PRR23CQ6ZRP0 262 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 LIMS2Q7Z4I7 341 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 OSTM1Q86WC4 334 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 FMNL3Q8IVF7 1028 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 FAM71AQ8IYT1 594 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TMEM86AQ8N2M4 240 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TTC39CQ8N584 583 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 KBTBD7Q8WVZ9 684 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 SYN2Q92777 582 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-228ENST00000641847 CLDN23Q96B33 292 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TWNKQ96RR1 684 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 IER2Q9BTL4 223 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 PRKD2Q9BZL6 878 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 SNX25Q9H3E2 840 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 PRMT8Q9NR22 394 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-228ENST00000641847 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.98□□□□□ -0.81
PHGDH-228ENST00000641847 ZNHIT6Q9NWK9 470 aaKnown RBP9.98□□□□□ -0.81
PHGDH-228ENST00000641847 AIPL1Q9NZN9 384 aa9.98□□□□□ -0.81
PHGDH-228ENST00000641847 TIMM13Q9Y5L4 95 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-228ENST00000641847 VWA8A3KMH1 1905 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 LAMA1P25391 3075 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 SOBPA7XYQ1 873 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 A8MXQ7 604 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 SYN3O14994 580 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 HCRTO43612 131 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 CYP11A1P05108 521 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 CCDC172P0C7W6 258 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 TYMPP19971 482 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 PMLP29590 882 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 GNA15P30679 374 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 HNRNPH3P31942 346 aaKnown RBP9.97□□□□□ -0.81
PHGDH-228ENST00000641847 PDE6CP51160 858 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 NDST1P52848 882 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 ADCY1Q08828 1119 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 ELAVL2Q12926 359 aaKnown RBP9.97□□□□□ -0.81
PHGDH-228ENST00000641847 SIM2Q14190 667 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-228ENST00000641847 MEA1Q16626 185 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 ZNF394Q53GI3 561 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 TDRD12Q587J7 1177 aaKnown RBP9.97□□□□□ -0.81
PHGDH-228ENST00000641847 N4BP2L1Q5TBK1 243 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-228ENST00000641847 SMYD5Q6GMV2 418 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 WDR59Q6PJI9 974 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 DPH6Q7L8W6 267 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 METTL23Q86XA0 190 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 CCDC112Q8NEF3 446 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 OR6B3Q8NGW1 331 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 SPATA18Q8TC71 538 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 WHAMMQ8TF30 809 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 FGF14Q92915 247 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 ZNF707Q96C28 371 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-228ENST00000641847 HERC2P3Q9BVR0 1158 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 VN1R3Q9BXE9 311 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 ELOVL4Q9GZR5 314 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 DDX43Q9NXZ2 648 aaKnown RBP9.97□□□□□ -0.81
PHGDH-228ENST00000641847 DSEQ9UL01 958 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 CDH7Q9ULB5 785 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 CNTN6Q9UQ52 1028 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 MTF2Q9Y483 593 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-228ENST00000641847 NME7Q9Y5B8 376 aa9.97□□□□□ -0.81
PHGDH-228ENST00000641847 CALCAP01258 141 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 SERPING1P05155 500 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 PAEPP09466 180 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 SPATA31D3P0C874 917 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 SKILP12757 684 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 CYP11B1P15538 503 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 CD72P21854 359 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 FGFR3P22607 806 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 FECHP22830 423 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 ACAT1P24752 427 aaKnown RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 TKTP29401 623 aaKnown RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 CNR2P34972 360 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 CLCN1P35523 988 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 DEKP35659 375 aaKnown RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 GNL1P36915 607 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 PRKCIP41743 596 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 CCR3P51677 355 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 RAD23BP54727 409 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 YWHAHQ04917 246 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 KLHL30Q0D2K2 578 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 MTAPQ13126 283 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 AASDHQ4L235 1098 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 LIN9Q5TKA1 542 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 FAM171A1Q5VUB5 890 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 HGSNATQ68CP4 663 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 OVOS1Q6IE37 1185 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 PARM1Q6UWI2 310 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 SPATA31D4Q6ZUB0 917 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 TPRG1Q6ZUI0 275 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 IRF2BP2Q7Z5L9 587 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 SLC47A2Q86VL8 602 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 UNC93AQ86WB7 457 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 PALB2Q86YC2 1186 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 TMEM139Q8IV31 216 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 LRRC8AQ8IWT6 810 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 C12orf50Q8NA57 414 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 SLC4A11Q8NBS3 891 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 EPS8L1Q8TE68 723 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 SLC20A1Q8WUM9 679 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 B3GALT6Q96L58 329 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms