RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 VSTM1Q6UX27 236 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 TMEM110Q86TL2 294 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 SCUBE3Q8IX30 993 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 SIX6OS1Q8N1H7 587 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 MRPL43Q8N983 215 aaKnown RBP9.24□□□□□ -0.93
HLA-B-258ENST00000640615 ZMIZ2Q8NF64 920 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 ZNF461Q8TAF7 563 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 SLC35G2Q8TBE7 412 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 KCTD13Q8WZ19 329 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 KLHL5Q96PQ7 755 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 SEPT5Q99719 369 aaPredicted RBP9.24□□□□□ -0.93
HLA-B-258ENST00000640615 NUP85Q9BW27 656 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 SLC4A5Q9BY07 1137 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 UBXN6Q9BZV1 441 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 CSNK1G1Q9HCP0 422 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 MRPL47Q9HD33 250 aaKnown RBP9.24□□□□□ -0.93
HLA-B-258ENST00000640615 NGRNQ9NPE2 291 aaKnown RBP9.24□□□□□ -0.93
HLA-B-258ENST00000640615 CYLDQ9NQC7 956 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 AVENQ9NQS1 362 aaPredicted RBP9.24□□□□□ -0.93
HLA-B-258ENST00000640615 TMEM30AQ9NV96 361 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 PARVAQ9NVD7 372 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 WDR35Q9P2L0 1181 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 AFF4Q9UHB7 1163 aaKnown RBP9.24□□□□□ -0.93
HLA-B-258ENST00000640615 PCDHGC5Q9Y5F6 944 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 NCANO14594 1321 aa9.24□□□□□ -0.93
HLA-B-258ENST00000640615 A0A0A6YYK5 440 aaPredicted RBP9.23□□□□□ -0.93
HLA-B-258ENST00000640615 HIDE1A8MVS5 230 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 BTNL10A8MVZ5 291 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 FSCN2O14926 492 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 TRIM66O15016 1216 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 KIF5CO60282 957 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 GABBR2O75899 941 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 SOAT2O75908 522 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 ABLIM3O94929 683 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 MOCS3O95396 460 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 GJB6O95452 261 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 VNN2O95498 520 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 ADH1AP07327 375 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 KLRC2P26717 231 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 ELF1P32519 619 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 IRS1P35568 1242 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 TUFMP49411 452 aaKnown RBP9.23□□□□□ -0.93
HLA-B-258ENST00000640615 GPR15P49685 360 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 TKTL1P51854 596 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 RPL10AP62906 217 aaKnown RBP9.23□□□□□ -0.93
HLA-B-258ENST00000640615 ADIGQ0VDE8 80 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 MAMLD1Q13495 774 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 ZNF268Q14587 947 aaPredicted RBP9.23□□□□□ -0.93
HLA-B-258ENST00000640615 IFI16Q16666 785 aaKnown RBP9.23□□□□□ -0.93
HLA-B-258ENST00000640615 DDR2Q16832 855 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 SDHAF4Q5VUM1 108 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 PLEKHA7Q6IQ23 1121 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 FAM183BPQ6ZVS7 135 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 GPRIN1Q7Z2K8 1008 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 XYLT1Q86Y38 959 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 RHOT2Q8IXI1 618 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 TTC9BQ8N6N2 239 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 MAFAQ8NHW3 353 aaPredicted RBP9.23□□□□□ -0.93
HLA-B-258ENST00000640615 RFFLQ8WZ73 363 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 TIFAQ96CG3 184 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 C8orf48Q96LL4 319 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 SELENOOQ9BVL4 669 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 CRISPLD1Q9H336 500 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 CYP4F11Q9HBI6 524 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 UVRAGQ9P2Y5 699 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 SALL4Q9UJQ4 1053 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 SCINQ9Y6U3 715 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 TSC2P49815 1807 aa9.23□□□□□ -0.93
HLA-B-258ENST00000640615 C2orf71A6NGG8 1288 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 SIGLEC16A6NMB1 481 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 TMEM110-MUSTN1A8MSY1 372 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 HHLA1C9JL84 531 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 PRRG1O14668 218 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 PAPSS1O43252 624 aaPredicted RBP9.22□□□□□ -0.93
HLA-B-258ENST00000640615 SEC24AO95486 1093 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 SPATA31D3P0C874 917 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 KRT3P12035 628 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 ATF2P15336 505 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 ALDH1A3P47895 512 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 RPL34P49207 117 aaKnown RBP9.22□□□□□ -0.93
HLA-B-258ENST00000640615 RNASE9P60153 205 aaKnown RBP9.22□□□□□ -0.93
HLA-B-258ENST00000640615 GNG11P61952 73 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 SLC6A3Q01959 620 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 IFRD2Q12894 506 aaPredicted RBP9.22□□□□□ -0.93
HLA-B-258ENST00000640615 CAMK1Q14012 370 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 TCEAL1Q15170 157 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 ZNF569Q5MCW4 686 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 FAM102AQ5T9C2 384 aaPredicted RBP9.22□□□□□ -0.93
HLA-B-258ENST00000640615 PDE12Q6L8Q7 609 aaKnown RBP9.22□□□□□ -0.93
HLA-B-258ENST00000640615 DCUN1D2Q6PH85 259 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 SPATA31D4Q6ZUB0 917 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 ZDHHC17Q8IUH5 632 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 NUP93Q8N1F7 819 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 RNF10Q8N5U6 811 aaKnown RBP9.22□□□□□ -0.93
HLA-B-258ENST00000640615 C3orf20Q8ND61 904 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 SCAMP5Q8TAC9 235 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 FEZF2Q8TBJ5 459 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 ZNF564Q8TBZ8 553 aaPredicted RBP9.22□□□□□ -0.93
HLA-B-258ENST00000640615 GPR152Q8TDT2 470 aa9.22□□□□□ -0.93
HLA-B-258ENST00000640615 GIPC2Q8TF65 315 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms