RNA–Protein interactions for RNA: ENST00000640501.1

PNKP-231, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 151 nt, Biotype non stop decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-231ENST00000640501 ADORA2BP29275 332 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 THPOP40225 353 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 NR2C2P49116 596 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 ZNF135P52742 658 aaPredicted RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 GYS2P54840 703 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 AIF1P55008 147 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 CDH6P55285 790 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 PRMT2P55345 433 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 LILRA4P59901 499 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 GNGT1P63211 74 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 ROR1Q01973 937 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 OGDHQ02218 1023 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 PDE4CQ08493 712 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 SLC29A2Q14542 456 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 STAT4Q14765 748 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 UAP1Q16222 522 aaPredicted RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 TAZQ16635 292 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 PTGISQ16647 500 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 PKDCCQ504Y2 493 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 KCTD16Q68DU8 428 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 SCYL2Q6P3W7 929 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 OLFML1Q6UWY5 402 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 MICALCLQ6ZW33 695 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 B4GALNT4Q76KP1 1039 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 STRADAQ7RTN6 431 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 CPNE8Q86YQ8 564 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 PPIL6Q8IXY8 311 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 ZDHHC14Q8IZN3 488 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 SIX6OS1Q8N1H7 587 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 THEM5Q8N1Q8 247 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 ZCCHC9Q8N567 271 aaKnown RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 EMC1Q8N766 993 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 C12orf29Q8N999 325 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 B3GALNT2Q8NCR0 500 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 SMG8Q8ND04 991 aaKnown RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 FAM172AQ8WUF8 416 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 TMEM40Q8WWA1 233 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 KCTD13Q8WZ19 329 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 TRIB2Q92519 343 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 ARL8AQ96BM9 186 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 LENG1Q96BZ8 264 aaPredicted RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 GLT1D1Q96MS3 346 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 PPP1R10Q96QC0 940 aaKnown RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 HNRNPABQ99729 332 aaKnown RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 ZNF670Q9BS34 389 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 MED10Q9BTT4 135 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 SENP6Q9GZR1 1112 aaPredicted RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 NGRNQ9NPE2 291 aaKnown RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.7□□□□□ -1.02
PNKP-231ENST00000640501 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.7□□□□□ -1.02
PNKP-231ENST00000640501 KLK14Q9P0G3 267 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 RCOR3Q9P2K3 495 aaPredicted RBP8.7□□□□□ -1.02
PNKP-231ENST00000640501 NFS1Q9Y697 457 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 PTCH2Q9Y6C5 1203 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 TRIP11Q15643 1979 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 DOCK3Q8IZD9 2030 aa8.7□□□□□ -1.02
PNKP-231ENST00000640501 A0A087WUV0 522 aaPredicted RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 ERICH4A6NGS2 130 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 APOL1O14791 398 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 ADAMTS4O75173 837 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 CDH16O75309 829 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 TCEA3O75764 348 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 STK10O94804 968 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 TTC4O95801 387 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 PGK1P00558 417 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 ABHD2P08910 425 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 PDGFRBP09619 1106 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 PRKAR2AP13861 404 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 TSHRP16473 764 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 NPR3P17342 541 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 PTPN1P18031 435 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 KLRC2P26717 231 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 HPDP32754 393 aaPredicted RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 FLT3P36888 993 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 ARL4AP40617 200 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 MDH1P40925 334 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 RPL34P49207 117 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 RGS7P49802 495 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 IRAK1P51617 712 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 ARL4CP56559 192 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 EIF3EP60228 445 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 ZNF200P98182 395 aaPredicted RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 OTUD4Q01804 1114 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 PRKCZQ05513 592 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 CACNB2Q08289 660 aaPredicted RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 GRIK3Q13003 919 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 GPS1Q13098 491 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 OASLQ15646 514 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 SMTNL2Q2TAL5 461 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 ERMARDQ5T6L9 678 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 DAB2IPQ5VWQ8 1189 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 GDF6Q6KF10 455 aaPredicted RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 MFSD5Q6N075 450 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 HIBCHQ6NVY1 386 aaPredicted RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 PMF1Q6P1K2 205 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 RHBDF2Q6PJF5 856 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 PDZD4Q76G19 769 aaPredicted RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 LIMS2Q7Z4I7 341 aa8.69□□□□□ -1.02
PNKP-231ENST00000640501 MRPL10Q7Z7H8 261 aaKnown RBP8.69□□□□□ -1.02
PNKP-231ENST00000640501 TTC30AQ86WT1 665 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms