RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 ADH1AP07327 375 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 TUFMP49411 452 aaKnown RBP5.93□□□□□ -1.46
RTTN-218ENST00000640408 TIGD5Q53EQ6 642 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 CCSAPQ6IQ19 270 aaPredicted RBP5.93□□□□□ -1.46
RTTN-218ENST00000640408 SIX5Q8N196 739 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 PARD3BQ8TEW8 1205 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 TRIM56Q9BRZ2 755 aaKnown RBP5.93□□□□□ -1.46
RTTN-218ENST00000640408 FAM129AQ9BZQ8 928 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 DPH5Q9H2P9 285 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 TMCO1Q9UM00 188 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 ARL2BPQ9Y2Y0 163 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 GMEB1Q9Y692 573 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 MYADML2A6NDP7 307 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 TRIM16O95361 564 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 SYF2O95926 243 aaKnown RBP5.93□□□□□ -1.46
RTTN-218ENST00000640408 CTNNB1P35222 781 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 MAGEA8P43361 318 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 COPB1P53618 953 aaKnown RBP5.93□□□□□ -1.46
RTTN-218ENST00000640408 TUBA3CQ13748 450 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 NCOA4Q13772 614 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 RAPGEF1Q13905 1077 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 KDM7AQ6ZMT4 941 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 PALM2Q8IXS6 379 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 GRAMD1CQ8IYS0 662 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 SCFD1Q8WVM8 642 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 GAD1Q99259 594 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 CYTH2Q99418 400 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 NIF3L1Q9GZT8 377 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 VPS37BQ9H9H4 285 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 PIDD1Q9HB75 910 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 PRG3Q9Y2Y8 225 aaPredicted RBP5.93□□□□□ -1.46
RTTN-218ENST00000640408 SESN1Q9Y6P5 492 aa5.93□□□□□ -1.46
RTTN-218ENST00000640408 CASP8AP2Q9UKL3 1982 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 ZBTB24O43167 697 aaPredicted RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 KRT6AP02538 564 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 KRT6BP04259 564 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 CAPN1P07384 714 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 PYGBP11216 843 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 NQO1P15559 274 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 TNFAIP3P21580 790 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 SCTRP47872 440 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 GUCY1A3Q02108 690 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 USP41Q3LFD5 358 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 OTOP2Q7RTS6 562 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 OR6B3Q8NGW1 331 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 FUT8Q9BYC5 575 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 PITPNM3Q9BZ71 974 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 NACA2Q9H009 215 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 GOLPH3LQ9H4A5 285 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 LRRC4Q9HBW1 653 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 RGS18Q9NS28 235 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 C6orf203Q9P0P8 240 aaPredicted RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 NXF1Q9UBU9 619 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 CAB39Q9Y376 341 aaPredicted RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 GREB1LQ9C091 1923 aaPredicted RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 TMEM265A0A087WTH1 108 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 TSPAN1O60635 241 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 XYLBO75191 536 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 PRR29P0C7W0 189 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 MYBP10242 640 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 MAN1A1P33908 653 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 ACOT2P49753 483 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 GSCP56915 257 aaPredicted RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 CAP1Q01518 475 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 MBTD1Q05BQ5 628 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 ZCWPW2Q504Y3 356 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 PLEKHG4Q58EX7 1191 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 TEDDM1Q5T9Z0 273 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 AGBL2Q5U5Z8 902 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 DACT3Q96B18 629 aaPredicted RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 LRRC37BQ96QE4 947 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 MED10Q9BTT4 135 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 RAD21L1Q9H4I0 556 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 DPP3Q9NY33 737 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 TMA7Q9Y2S6 64 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 PCDHA11Q9Y5I1 949 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 GOLGA8IPA6NC78 632 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 GOLGA8JA6NMD2 632 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 ENC1O14682 589 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 SYN3O14994 580 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 CPB1P15086 417 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 CSF2RAP15509 400 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 CCNHP51946 323 aaPredicted RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 VSNL1P62760 191 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 MTA1Q13330 715 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 LPIN1Q14693 890 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 SKIV2LQ15477 1246 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 KAZNQ674X7 775 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 TRAF7Q6Q0C0 670 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 TMC5Q6UXY8 1006 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 TRPM8Q7Z2W7 1104 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 YTHDF3Q7Z739 585 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 UNC93AQ86WB7 457 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 RASSF3Q86WH2 238 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 RBM12BQ8IXT5 1001 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 MAGEC3Q8TD91 643 aa5.92□□□□□ -1.46
RTTN-218ENST00000640408 TGS1Q96RS0 853 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 MAK16Q9BXY0 300 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 MRPL17Q9NRX2 175 aaKnown RBP5.92□□□□□ -1.46
RTTN-218ENST00000640408 ATAD3AQ9NVI7 634 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms