RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.95□□□□□ -1.14
NECAP1-220ENST00000639841 PRSS50Q9UI38 385 aa7.95□□□□□ -1.14
NECAP1-220ENST00000639841 DNMT3LQ9UJW3 386 aa7.95□□□□□ -1.14
NECAP1-220ENST00000639841 GGA1Q9UJY5 639 aa7.95□□□□□ -1.14
NECAP1-220ENST00000639841 NSFL1CQ9UNZ2 370 aaKnown RBP7.95□□□□□ -1.14
NECAP1-220ENST00000639841 NAALADL1Q9UQQ1 740 aa7.95□□□□□ -1.14
NECAP1-220ENST00000639841 TRIM43BA6NCK2 446 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 TBX10O75333 385 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 PFKMP08237 780 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 IL1R1P14778 569 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 PAMP19021 973 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 ADH7P40394 386 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 PCBP4P57723 403 aaKnown RBP7.94□□□□□ -1.14
NECAP1-220ENST00000639841 RPS8P62241 208 aaKnown RBP7.94□□□□□ -1.14
NECAP1-220ENST00000639841 SPIDRQ14159 915 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 KYNUQ16719 465 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 FAM117BQ6P1L5 589 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 COPS6Q7L5N1 327 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 ARMC9Q7Z3E5 817 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 CPNE8Q86YQ8 564 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 ARMC8Q8IUR7 673 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 APOBEC3FQ8IUX4 373 aaKnown RBP7.94□□□□□ -1.14
NECAP1-220ENST00000639841 ADSSL1Q8N142 457 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 TRIML1Q8N9V2 468 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 GDAP1Q8TB36 358 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 TRIM43Q96BQ3 446 aaPredicted RBP7.94□□□□□ -1.14
NECAP1-220ENST00000639841 MAML3Q96JK9 1138 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 NOX5Q96PH1 765 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 NDST4Q9H3R1 872 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 MKNK2Q9HBH9 465 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 CDY2AQ9Y6F7 541 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 XDHP47989 1333 aa7.94□□□□□ -1.14
NECAP1-220ENST00000639841 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 TSPAN3O60637 253 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 FKTNO75072 461 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 PRKCBP05771 671 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 QDPRP09417 244 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 GSPT1P15170 499 aaKnown RBP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 IFNAR1P17181 557 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 RAC1P63000 192 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 HP1BP3Q5SSJ5 553 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 LRCH2Q5VUJ6 765 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 OTUD7BQ6GQQ9 843 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 MFSD5Q6N075 450 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 ZNF804AQ7Z570 1209 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 MICU3Q86XE3 530 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 GALNT11Q8NCW6 608 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 ZNF540Q8NDQ6 660 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 TBC1D16Q8TBP0 767 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 FATE1Q969F0 183 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 MDFIQ99750 246 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 VRK1Q99986 396 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 ATXN3LQ9H3M9 355 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 SMURF2Q9HAU4 748 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 SMG5Q9UPR3 1016 aaKnown RBP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 TIMM13Q9Y5L4 95 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 SHISA3A0PJX4 238 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 MANSC4A6NHS7 340 aaPredicted RBP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 CCDC69A6NI79 296 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 CAPN9O14815 690 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 PRPF6O94906 941 aaKnown RBP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 ANXA1P04083 346 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 SRGAP2BP0DMP2 458 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 C6P13671 934 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 CAPN2P17655 700 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 EIF2S2P20042 333 aaKnown RBP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 SDHAP31040 664 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 SOX10P56693 466 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 PSMC6P62333 389 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.93□□□□□ -1.14
NECAP1-220ENST00000639841 MAMLD1Q13495 774 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 BAK1Q16611 211 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 USP51Q70EK9 711 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 UNC13DQ70J99 1090 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 VGLL2Q8N8G2 317 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 TAF4BQ92750 862 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 PTP4A1Q93096 173 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 ERVK-5Q9HDB9 667 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 RXFP3Q9NSD7 469 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 MIS18AQ9NYP9 233 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 RTL9Q8NET4 1388 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 MED23Q9ULK4 1368 aa7.93□□□□□ -1.14
NECAP1-220ENST00000639841 ADM5C9JUS6 153 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 VILLO15195 856 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 MYO1BO43795 1136 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 UFL1O94874 794 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 CLEC3BP05452 202 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 RAD23AP54725 363 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 YBEYP58557 167 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-220ENST00000639841 NMIQ13287 307 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-220ENST00000639841 SUZ12Q15022 739 aaKnown RBP7.92□□□□□ -1.14
NECAP1-220ENST00000639841 KHDC1Q4VXA5 237 aaKnown RBP7.92□□□□□ -1.14
NECAP1-220ENST00000639841 CPLX4Q7Z7G2 160 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 PPP1R3BQ86XI6 285 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 CCDC117Q8IWD4 279 aaPredicted RBP7.92□□□□□ -1.14
NECAP1-220ENST00000639841 UNC45BQ8IWX7 931 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 SPC24Q8NBT2 197 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 AGBL5Q8NDL9 886 aa7.92□□□□□ -1.14
NECAP1-220ENST00000639841 IPMKQ8NFU5 416 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms