RNA–Protein interactions for RNA: ENST00000638903.1

PAX6-243, Transcript of paired box 6, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PAX6, Length 2,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-243ENST00000638903 TRIM49D1C9J1S8 452 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 RNASEH1O60930 286 aaKnown RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 NPR1P16066 1061 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 CFAP157Q5JU67 520 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 TMCO4Q5TGY1 634 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 ATG16L1Q676U5 607 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 MCF2L2Q86YR7 1114 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 TRIM42Q8IWZ5 723 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 SEPT12Q8IYM1 358 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 SLC25A41Q8N5S1 370 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 E2F7Q96AV8 911 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 MASTLQ96GX5 879 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 RBAKQ9NYW8 714 aaPredicted RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 IL1RAPL1Q9NZN1 696 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 PPME1Q9Y570 386 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 TEX264Q9Y6I9 313 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 LSM8O95777 96 aaKnown RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 KITP10721 976 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 ALDH1B1P30837 517 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 STIP1P31948 543 aaKnown RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 PTGER2P43116 358 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 ZNF132P52740 706 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 ALDH18A1P54886 795 aaKnown RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 DPYSL3Q14195 570 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 CYP4A22Q5TCH4 519 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 TTC39BQ5VTQ0 682 aaPredicted RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 SLC26A11Q86WA9 606 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 TMEM35BQ8NCS4 154 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 SYTL5Q8TDW5 730 aaPredicted RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 TAAR1Q96RJ0 339 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 NDNQ99608 321 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 CCDC106Q9BWC9 280 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 EBF3Q9H4W6 596 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 ZNF395Q9H8N7 513 aaPredicted RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 HOMER2Q9NSB8 354 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 SLC9A2Q9UBY0 812 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 MARCOQ9UEW3 520 aaPredicted RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 PLLPQ9Y342 182 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 SLC4A7Q9Y6M7 1214 aa12.12□□□□□ -0.47
PAX6-243ENST00000638903 COL2A1P02458 1487 aaPredicted RBP12.12□□□□□ -0.47
PAX6-243ENST00000638903 PRR5-ARHGAP8B1AHC4 643 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 TCP10L2B9ZVM9 353 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 BUD23O43709 281 aaKnown RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 ZNF862O60290 1169 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 FKBP6O75344 327 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 SPAG6O75602 509 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 FAM155BO75949 473 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 KRT7P08729 469 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 PSMA2P25787 234 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 IL1R2P27930 398 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 CAP2P40123 477 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 NRLP54845 237 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 AQP5P55064 265 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 ARHGAP8P85298 464 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 SLC25A11Q02978 314 aaKnown RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 PGM5Q15124 567 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 KYAT3Q6YP21 454 aaKnown RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 RAPH1Q70E73 1250 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 MARK2Q7KZI7 788 aaKnown RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 CTAGE3PQ8IX95 158 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 ST13P4Q8IZP2 240 aaPredicted RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 CPXCR1Q8N123 301 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 MCPH1Q8NEM0 835 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 DTNBP1Q96EV8 351 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 GLIS2Q9BZE0 524 aaPredicted RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 C1orf21Q9H246 121 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 XPNPEP1Q9NQW7 623 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 STK32BQ9NY57 414 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 GABBR1Q9UBS5 961 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 PCDHA10Q9Y5I2 948 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 ZNF646O15015 1829 aaPredicted RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 CCDC195A0A1B0GUA6 201 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 TESPA1A2RU30 521 aaPredicted RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 SPDYE2BA6NHP3 402 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 DGAT1O75907 488 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 CD48P09326 243 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 WEE2P0C1S8 567 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 SPDYE6P0CI01 402 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 KDELR1P24390 212 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 RFC1P35251 1148 aaPredicted RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 EIF3EP60228 445 aaKnown RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 NCOA4Q13772 614 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 HNRNPDQ14103 355 aaKnown RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 TBCCQ15814 346 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 SPDYE2Q495Y8 402 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 SYCP2LQ5T4T6 812 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 CES4AQ5XG92 561 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 ACAD11Q709F0 780 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 PPM1NQ8N819 430 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 OR5B17Q8NGF7 314 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 RILPQ96NA2 401 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 OLFM3Q96PB7 478 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 HAPLN3Q96S86 360 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 UBE2OQ9C0C9 1292 aaKnown RBP12.11□□□□□ -0.47
PAX6-243ENST00000638903 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
PAX6-243ENST00000638903 H0YCG3 227 aa12.1□□□□□ -0.47
PAX6-243ENST00000638903 LRCH4O75427 683 aa12.1□□□□□ -0.47
PAX6-243ENST00000638903 KRT37O76014 449 aa12.1□□□□□ -0.47
PAX6-243ENST00000638903 SNRPAP09012 282 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms