RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RPTNQ6XPR3 784 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TRMT11Q7Z4G4 463 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SUGP1Q8IWZ8 645 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 DHX40Q8IX18 779 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF579Q8NAF0 562 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 NSUN7Q8NE18 718 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 FLCNQ8NFG4 579 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 RFFLQ8WZ73 363 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 CAAP1Q9H8G2 361 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SOHLH2Q9NX45 425 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PSMC3IPQ9P2W1 217 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PRKAG3Q9UGI9 489 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MCM8Q9UJA3 840 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 N6AMT1Q9Y5N5 214 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MYMKA6NI61 221 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SPTLC1O15269 473 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MGRN1O60291 552 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 CLUP10909 449 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ITGALP20701 1170 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 C21orf59P57076 290 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 LMBRD2Q68DH5 695 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ALKBH2Q6NS38 261 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 CDC73Q6P1J9 531 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TRAPPC11Q7Z392 1133 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TMC7Q7Z402 723 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SP8Q8IXZ3 490 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TRIM63Q969Q1 353 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 RPRD1AQ96P16 312 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 OMDQ99983 421 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PUS7LQ9H0K6 701 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 NPHS2Q9NP85 383 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PCMTD2Q9NV79 361 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 KCND2Q9NZV8 630 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 KANSL3Q9P2N6 904 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 NARFQ9UHQ1 456 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 VAV3Q9UKW4 847 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TDRKHQ9Y2W6 561 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 AFF2P51816 1311 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 OVOS2A0A0G2JMS6 1433 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 OVOS2A0A0J9YW53 1432 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 OVOS2Q6IE36 1432 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF500O60304 480 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PLEKHA8P1O95397 391 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ALDH2P05091 517 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 IL6P05231 212 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MYBP10242 640 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MYL4P12829 197 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 HSPA13P48723 471 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 RENBPP51606 427 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 THOP1P52888 689 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 AP1S2P56377 157 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 NRG3P56975 720 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SNRPFP62306 86 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF211Q13398 564 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 FUT11Q495W5 492 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TYW3Q6IPR3 259 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 KCNV2Q8TDN2 545 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 RUBCNQ92622 972 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM143Q96AN5 459 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM47Q9BQJ4 181 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 RANBP17Q9H2T7 1088 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 IGFLR1Q9H665 355 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 BARHL2Q9NY43 387 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 VPS28Q9UK41 221 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 RUVBL2Q9Y230 463 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MORC2Q9Y6X9 1032 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 MFAP3LO75121 409 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ACOT2P49753 483 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 FNDC3BQ53EP0 1204 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ARMC4Q5T2S8 1044 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 LINC00301Q8NCQ3 95 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SLC4A9Q96Q91 983 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 OSBPL1AQ9BXW6 950 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PARD6BQ9BYG5 372 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 UBE2OQ9C0C9 1292 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 CHORDC1Q9UHD1 332 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PDS5AQ29RF7 1337 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 EYA4O95677 639 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 PIK3R1P27986 724 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 RBBP4Q09028 425 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ACOX1Q15067 660 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TSNQ15631 228 aaKnown RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 NEK5Q6P3R8 708 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ANKRD13AQ8IZ07 590 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 CHST13Q8NET6 341 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TSPAN14Q8NG11 270 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 STARD7Q9NQZ5 370 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM39AQ9NV64 488 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TRIM10Q9UDY6 481 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 V9GYQ6 96 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.74□□□□□ -1.49
SCN1A-209ENST00000635750 TMEM114B3SHH9 223 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ATP10BO94823 1461 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 CCNB2O95067 398 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 AMD1P17707 334 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SOX11P35716 441 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 COPZ1P61923 177 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 SCARF1Q14162 830 aa5.74□□□□□ -1.49
SCN1A-209ENST00000635750 ZNHIT3Q15649 155 aaPredicted RBP5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms