RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 DPH1Q9BZG8 443 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 C11orf54Q9H0W9 315 aaPredicted RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 MYLK2Q9H1R3 596 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 MRPL46Q9H2W6 279 aaKnown RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 TRPV4Q9HBA0 871 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 ABCF3Q9NUQ8 709 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 KCTD5Q9NXV2 234 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 CGNQ9P2M7 1197 aaKnown RBP3.28□□□□□ -1.88
PSPC1-208ENST00000635562 CTNNA3Q9UI47 895 aa3.28□□□□□ -1.88
PSPC1-208ENST00000635562 IL16Q14005 1332 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 SYNJ2BP-COX16A0A087WUM0 186 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TSPY2A6NKD2 308 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TBKBP1A7MCY6 615 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 B5MCH6 92 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 H3BUI4 141 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 MPHOSPH10O00566 681 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 GRM6O15303 877 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 PHGDHO43175 533 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 RASA4O43374 803 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 SLC43A1O75387 559 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 B3GALNT1O75752 331 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 KIAA0754O94854 1291 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 MATN4O95460 622 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 APBB3O95704 486 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 DNTTP04053 509 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 CD1AP06126 327 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 SNRPA1P09661 255 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TSPY3P0CV98 308 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TSPY8P0CW00 308 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 KRT10P13645 584 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 PEX2P28328 305 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 ELF1P32519 619 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 PRPHP41219 470 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 ARFIP2P53365 341 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 RCAN1P53805 252 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 ATXN1P54253 815 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 CLRN1P58418 232 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TSPY1Q01534 308 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 BTKQ06187 659 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 MRPL28Q13084 256 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 SF3B3Q15393 1217 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TAF7Q15545 349 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 KIAA0753Q2KHM9 967 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 FAM214AQ32MH5 1076 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 FKBP15Q5T1M5 1219 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 C1QL3Q5VWW1 255 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 METRNLQ641Q3 311 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 LAIR1Q6GTX8 287 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 MFSD5Q6N075 450 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 HTR3DQ70Z44 454 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 BEND5Q7L4P6 421 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 ZNF627Q7L945 461 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 NLRP14Q86W24 1093 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 GALNT13Q8IUC8 556 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 GSPT2Q8IYD1 628 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 ELOA2Q8IYF1 753 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 COLGALT2Q8IYK4 626 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 SYNE4Q8N205 404 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 MYCT1Q8N699 235 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 NAT8LQ8N9F0 302 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 OR52N2Q8NGI0 321 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 SLC30A5Q8TAD4 765 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 GSDMBQ8TAX9 411 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 DEPTORQ8TB45 409 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TRIM63Q969Q1 353 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TEKT1Q969V4 418 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 APIPQ96GX9 242 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 NCAPGQ9BPX3 1015 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TREX2Q9BQ50 279 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 CHCHD6Q9BRQ6 235 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 C1orf43Q9BWL3 253 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 TTLL2Q9BWV7 592 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 BTBD1Q9H0C5 482 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 RWDD1Q9H446 243 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 SLC2A4RGQ9NR83 387 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 PLSCR4Q9NRQ2 329 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 IRAK4Q9NWZ3 460 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 CHCHD3Q9NX63 227 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 NSMCE4AQ9NXX6 385 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 C6orf203Q9P0P8 240 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 NCDNQ9UBB6 729 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 HECAQ9UBI9 543 aaPredicted RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 MTRRQ9UBK8 725 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 DKK3Q9UBP4 350 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 ZDHHC8Q9ULC8 765 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 AGTPBP1Q9UPW5 1226 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 ITM2BQ9Y287 266 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 RRP7AQ9Y3A4 280 aaKnown RBP3.27□□□□□ -1.89
PSPC1-208ENST00000635562 KNSTRNQ9Y448 316 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 PCDHGB6Q9Y5F9 930 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 SQORQ9Y6N5 450 aa3.27□□□□□ -1.89
PSPC1-208ENST00000635562 USP19O94966 1318 aa3.26□□□□□ -1.89
PSPC1-208ENST00000635562 C17orf113A0A1B0GUU1 675 aa3.26□□□□□ -1.89
PSPC1-208ENST00000635562 RRN3P2A6NIE6 340 aa3.26□□□□□ -1.89
PSPC1-208ENST00000635562 C2orf81A6NN90 581 aa3.26□□□□□ -1.89
PSPC1-208ENST00000635562 F5H0A9 414 aaPredicted RBP3.26□□□□□ -1.89
PSPC1-208ENST00000635562 H7C0S8 307 aa3.26□□□□□ -1.89
PSPC1-208ENST00000635562 P4HA2O15460 535 aa3.26□□□□□ -1.89
PSPC1-208ENST00000635562 SLC4A1P02730 911 aa3.26□□□□□ -1.89
PSPC1-208ENST00000635562 RAP2AP10114 183 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms