RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TAS2R14Q9NYV8 317 aa13.09□□□□□ -0.31
SYNGAP1-207ENST00000628646 GOLGA6BA6NDN3 693 aa13.08□□□□□ -0.31
SYNGAP1-207ENST00000628646 MIF4GDA9UHW6 222 aaKnown RBP13.08□□□□□ -0.31
SYNGAP1-207ENST00000628646 MMEP08473 750 aa13.08□□□□□ -0.31
SYNGAP1-207ENST00000628646 ATAD1Q8NBU5 361 aa13.08□□□□□ -0.31
SYNGAP1-207ENST00000628646 OSGEPQ9NPF4 335 aa13.08□□□□□ -0.31
SYNGAP1-207ENST00000628646 CALCOCO1Q9P1Z2 691 aa13.08□□□□□ -0.31
SYNGAP1-207ENST00000628646 MYL4P12829 197 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 BCAT1P54687 386 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 DSC3Q14574 896 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 C9orf50Q5SZB4 431 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 CMTR2Q8IYT2 770 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 SLC20A1Q8WUM9 679 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 SEC14L1Q92503 715 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 MAK16Q9BXY0 300 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 STRIP2Q9ULQ0 834 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 COG5Q9UP83 839 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 MRPL42Q9Y6G3 142 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 DDX3YO15523 660 aaKnown RBP13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 VNN1O95497 513 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 PAX3P23760 479 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 GALCP54803 685 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 WNT7BP56706 349 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 ADCY1Q08828 1119 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 CROCCP2Q86T23 111 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 UNC93AQ86WB7 457 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 CDH9Q9ULB4 789 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 CLDN5O00501 218 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 GLUD1P00367 558 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 GBP1P32455 592 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 PLCB3Q01970 1234 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 KCTD19Q17RG1 926 aaPredicted RBP13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 SDHAF4Q5VUM1 108 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 POF1BQ8WVV4 589 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 RFFLQ8WZ73 363 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 FBXO32Q969P5 355 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 ARL8AQ96BM9 186 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 ARHGEF26Q96DR7 871 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 KRT12Q99456 494 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 TMEM175Q9BSA9 504 aa13.08□□□□□ -0.32
SYNGAP1-207ENST00000628646 HEXIM1O94992 359 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 RALAP11233 206 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 ITGB8P26012 769 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 HOXC8P31273 242 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 TUFMP49411 452 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 NDUFV1P49821 464 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 DUSP4Q13115 394 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 MYLPFQ96A32 169 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 TIFAQ96CG3 184 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 IGSF21Q96ID5 467 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 ZIM3Q96PE6 472 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 APOBEC3GQ9HC16 384 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 NFU1Q9UMS0 254 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 HMBSP08397 361 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 MYZAPP0CAP1 466 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 GPC5P78333 572 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 ATP11AP98196 1134 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 NME3Q13232 169 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 HADHQ16836 314 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 SMARCD1Q96GM5 515 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 ELOVL4Q9GZR5 314 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 NEUROG2Q9H2A3 272 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 EPB41L5Q9HCM4 733 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 SIX4Q9UIU6 781 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 ANAPC7Q9UJX3 599 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 OR6C75A6NL08 312 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 SYN3O14994 580 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 SART1O43290 800 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 ATP2C2O75185 946 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 MOCS2O96007 188 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 PSMA2P25787 234 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 SDC4P31431 198 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 FAM76AQ8TAV0 307 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 PPP1R10Q96QC0 940 aaKnown RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 CHORDC1Q9UHD1 332 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 SLC12A6Q9UHW9 1150 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 LCMT1Q9UIC8 334 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 TTC7AQ9ULT0 858 aaPredicted RBP13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 NR2E1Q9Y466 385 aa13.07□□□□□ -0.32
SYNGAP1-207ENST00000628646 CDR2Q01850 454 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 TCEAL1Q15170 157 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 EMC10Q5UCC4 262 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 CEP128Q6ZU80 1094 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 COLGALT1Q8NBJ5 622 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 GPR152Q8TDT2 470 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 DMAP1Q9NPF5 467 aaPredicted RBP13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 SCINQ9Y6U3 715 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 MGAMO43451 1857 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 F8VP50 259 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 MYOGP15173 224 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 LMO2P25791 158 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 GUCY2DQ02846 1103 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 CALCOCO2Q13137 446 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 EIF1ADQ8N9N8 165 aaKnown RBP13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 KREMEN1Q96MU8 473 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 GPR62Q9BZJ7 368 aa13.06□□□□□ -0.32
SYNGAP1-207ENST00000628646 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms