RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 CSH1P0DML2 217 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CSH2P0DML3 217 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CCDC130P13994 396 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 EEF1GP26641 437 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 USP8P40818 1118 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CTSOP43234 321 aaPredicted RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 GPR15P49685 360 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 SLC8A3P57103 927 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CUL2Q13617 745 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 DDR2Q16832 855 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CCDC142Q17RM4 750 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 FKBP15Q5T1M5 1219 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 SDHAF4Q5VUM1 108 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 VSTM1Q6UX27 236 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 FAM35AQ86V20 835 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 UNC93AQ86WB7 457 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 GPR161Q8N6U8 529 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 TTC16Q8NEE8 873 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 FEZF2Q8TBJ5 459 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 ENOX1Q8TC92 643 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 SMARCD1Q96GM5 515 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 HEXIM2Q96MH2 286 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 ARID3AQ99856 593 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CRACR2AQ9BSW2 395 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 ZNF518BQ9C0D4 1074 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CRISPLD1Q9H336 500 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 ATXN3LQ9H3M9 355 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 ZNF395Q9H8N7 513 aaPredicted RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 APOBEC3GQ9HC16 384 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 DMAP1Q9NPF5 467 aaPredicted RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CRTAC1Q9NQ79 661 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CISHQ9NSE2 258 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 SAMSN1Q9NSI8 373 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 TAB2Q9NYJ8 693 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 EHD2Q9NZN4 543 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CEP72Q9P209 647 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 DNMT3BQ9UBC3 853 aaKnown RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 UXTQ9UBK9 157 aaPredicted RBP7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 HMGXB4Q9UGU5 601 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 CDH7Q9ULB5 785 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 USTQ9Y2C2 406 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 PCDHB4Q9Y5E5 795 aa7.67□□□□□ -1.18
NPLOC4-221ENST00000625705 A0A1W2PRU2 124 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 SLC38A8A6NNN8 435 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 F8VP50 259 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 GOLGA6L19H0YKK7 550 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 ERVH48-1M5A8F1 160 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 LRRN2O75325 713 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 VNN2O95498 520 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 ABL1P00519 1130 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 FAM200BP0CF97 657 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 GJA1P17302 382 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 CEBPBP17676 345 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 ATF6P18850 670 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 RFX1P22670 979 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 GABRR2P28476 465 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 CDC25CP30307 473 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 MAGEA11P43364 429 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 ZNF165P49910 485 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 MFAP3P55082 362 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 INCA1Q0VD86 236 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 EXOC3L4Q17RC7 722 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 CFAP221Q4G0U5 840 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 TMEM259Q4ZIN3 620 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 VWA3BQ502W6 1294 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 TCP11X2Q5H9J9 407 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 FAM171BQ6P995 826 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 TMEM270Q6UE05 265 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 MTSS1LQ765P7 747 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 RRAGAQ7L523 313 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 DNAJB7Q7Z6W7 309 aaPredicted RBP7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 RNF135Q8IUD6 432 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 STKLD1Q8NE28 680 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 ITFG1Q8TB96 612 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 SLC2A14Q8TDB8 520 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 MRPS31Q92665 395 aaKnown RBP7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 FGF13Q92913 245 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 PSMG2Q969U7 264 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 MCRS1Q96EZ8 462 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 TMEM176AQ96HP8 235 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 FAXDC2Q96IV6 333 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 B3GNT5Q9BYG0 378 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 VPS16Q9H269 839 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 NDST4Q9H3R1 872 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 TRPC7Q9HCX4 862 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 POLMQ9NP87 494 aaPredicted RBP7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 UBE2TQ9NPD8 197 aaPredicted RBP7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 FANCLQ9NW38 375 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 HESX1Q9UBX0 185 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 COQ4Q9Y3A0 265 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 ZFP37Q9Y6Q3 630 aaPredicted RBP7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 LAMA3Q16787 3333 aa7.66□□□□□ -1.18
NPLOC4-221ENST00000625705 LOC730098B7Z3J9 87 aa7.65□□□□□ -1.18
NPLOC4-221ENST00000625705 CILPO75339 1184 aa7.65□□□□□ -1.18
NPLOC4-221ENST00000625705 ASGR2P07307 311 aa7.65□□□□□ -1.18
NPLOC4-221ENST00000625705 LAMP2P13473 410 aa7.65□□□□□ -1.18
NPLOC4-221ENST00000625705 CYP4F8P98187 520 aa7.65□□□□□ -1.18
NPLOC4-221ENST00000625705 MTMR3Q13615 1198 aa7.65□□□□□ -1.18
NPLOC4-221ENST00000625705 RAPGEF1Q13905 1077 aa7.65□□□□□ -1.18
NPLOC4-221ENST00000625705 TEAD2Q15562 447 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms