RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 NXF1Q9UBU9 619 aaKnown RBP21.21■□□□□ 0.99
R3HCC1-210ENST00000625275 RALGAPA1Q6GYQ0 2036 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 AP5Z1O43299 807 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 ACAT1P24752 427 aaKnown RBP21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 MLLT6P55198 1093 aaPredicted RBP21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 CSTF1Q05048 431 aaKnown RBP21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 NR1I3Q14994 352 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 ARHGAP29Q52LW3 1261 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 WDR44Q5JSH3 913 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 OSTM1Q86WC4 334 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 PKMYT1Q99640 499 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 CHRDQ9H2X0 955 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 PRMT8Q9NR22 394 aaPredicted RBP21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 ZMYM5Q9UJ78 669 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 SPAG17Q6Q759 2223 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 MYO16Q9Y6X6 1858 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 HMGA1P17096 107 aaKnown RBP21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 PCSK1P29120 753 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 LHX1P48742 406 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 APBA1Q02410 837 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 LRMPQ12912 555 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 SARM1Q6SZW1 724 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 TATDN2Q93075 761 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 LRRC3BQ96PB8 259 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 IER2Q9BTL4 223 aa21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 XPO4Q9C0E2 1151 aaKnown RBP21.2■□□□□ 0.98
R3HCC1-210ENST00000625275 SLC38A8A6NNN8 435 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 GABRDO14764 452 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 CSH1P0DML2 217 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 CSH2P0DML3 217 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 ASPAP45381 313 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 GPR15P49685 360 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 KLK7P49862 253 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 RPL10AP62906 217 aaKnown RBP21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 TNNC1P63316 161 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 PLCB2Q00722 1185 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 MTAPQ13126 283 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 SYCP1Q15431 976 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 SOWAHAQ2M3V2 549 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 DPY19L2P1Q6NXN4 242 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 C1orf228Q6PIY5 440 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 TMEM150AQ86TG1 271 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 BPIFB1Q8TDL5 484 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 NT5C1BQ96P26 610 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 ERGIC2Q96RQ1 377 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 NIF3L1Q9GZT8 377 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 C8orf33Q9H7E9 229 aaPredicted RBP21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 SIX2Q9NPC8 291 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 SIK3Q9Y2K2 1263 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 PCDHGA2Q9Y5H1 932 aa21.19■□□□□ 0.98
R3HCC1-210ENST00000625275 KPNA1P52294 538 aaPredicted RBP21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 CCDC142Q17RM4 750 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 SCARA5Q6ZMJ2 495 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 DPH6Q7L8W6 267 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 LIMS2Q7Z4I7 341 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 ARHGEF19Q8IW93 802 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 CMTM8Q8IZV2 173 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 STKLD1Q8NE28 680 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 ZFYVE19Q96K21 471 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 MMS19Q96T76 1030 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 SLC46A2Q9BY10 475 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 SMYD3Q9H7B4 428 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 GTF3C4Q9UKN8 822 aa21.18■□□□□ 0.98
R3HCC1-210ENST00000625275 KIAA1549LQ6ZVL6 1849 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 HCRTO43612 131 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 F11P03951 625 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 P4HA1P13674 534 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 CYP2F1P24903 491 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 DDX6P26196 483 aaKnown RBP eCLIP21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 SOX9P48436 509 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 CFAP221Q4G0U5 840 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 SDHAF4Q5VUM1 108 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 CELF5Q8N6W0 485 aaKnown RBP21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 NELL1Q92832 810 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 ARID3AQ99856 593 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 LSM14BQ9BX40 385 aaKnown RBP21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 SMG9Q9H0W8 520 aaKnown RBP21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 LMAN1LQ9HAT1 526 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 ZSCAN32Q9NX65 697 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 APEX2Q9UBZ4 518 aa21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 MAGED2Q9UNF1 606 aaPredicted RBP21.17■□□□□ 0.98
R3HCC1-210ENST00000625275 CTHP32929 405 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 RAP1GAPP47736 663 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 DDR2Q16832 855 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 TSSK4Q6SA08 328 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 RALGPS2Q86X27 583 aaPredicted RBP21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 SPATA2LQ8IUW3 424 aaPredicted RBP21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 PPM1KQ8N3J5 372 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 MAB21L3Q8N8X9 362 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 ZBTB44Q8NCP5 570 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 KBTBD7Q8WVZ9 684 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 ATRIPQ8WXE1 791 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 MRPS31Q92665 395 aaKnown RBP21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 FUBP3Q96I24 572 aaKnown RBP eCLIP21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 FAXDC2Q96IV6 333 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 SYT15Q9BQS2 421 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 SDCBP2Q9H190 292 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 GTSE1Q9NYZ3 720 aa21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 UXTQ9UBK9 157 aaPredicted RBP21.16■□□□□ 0.98
R3HCC1-210ENST00000625275 A0A1W2PQC6 194 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms