RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 APOC4-APOC2K7ER74 178 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 ENDOD1O94919 500 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 APOC2P02655 101 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 NPR3P17342 541 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 PTPN1P18031 435 aaKnown RBP17.13■□□□□ 0.33
LDB3-208ENST00000623007 KCNJ1P48048 391 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 CDR1P51861 262 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 IFFO1Q0D2I5 559 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 LPIN1Q14693 890 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 EMC10Q5UCC4 262 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 DSTYKQ6XUX3 929 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 STRADAQ7RTN6 431 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 RELL1Q8IUW5 271 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 EMC1Q8N766 993 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 GSTCDQ8NEC7 633 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 CD99L2Q8TCZ2 262 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 RAPGEF5Q92565 580 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 PHACTR1Q9C0D0 580 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 NEUROG2Q9H2A3 272 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 CXCL16Q9H2A7 254 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 ZWILCHQ9H900 591 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 NEU2Q9Y3R4 380 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 GRIN2DO15399 1336 aa17.13■□□□□ 0.33
LDB3-208ENST00000623007 C3orf70A6NLC5 250 aaPredicted RBP17.12■□□□□ 0.33
LDB3-208ENST00000623007 FKTNO75072 461 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 PDGFRBP09619 1106 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 ZFXP17010 805 aaPredicted RBP17.12■□□□□ 0.33
LDB3-208ENST00000623007 CD52P31358 61 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 TUSC3Q13454 348 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 SNX1Q13596 522 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 TRIM71Q2Q1W2 868 aaKnown RBP17.12■□□□□ 0.33
LDB3-208ENST00000623007 AGBL2Q5U5Z8 902 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 AGMOQ6ZNB7 445 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 ALLCQ8N6M5 410 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 SLC43A3Q8NBI5 491 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 SLC2A14Q8TDB8 520 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 PIK3R5Q8WYR1 880 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 ZFP42Q96MM3 310 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 AGO3Q9H9G7 860 aaKnown RBP17.12■□□□□ 0.33
LDB3-208ENST00000623007 PCDH9Q9HC56 1237 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 RRN3Q9NYV6 651 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 KANSL3Q9P2N6 904 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 TJP2Q9UDY2 1190 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 ANAPC5Q9UJX4 755 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 ATP8A1Q9Y2Q0 1164 aa17.12■□□□□ 0.33
LDB3-208ENST00000623007 PAPSS1O43252 624 aaPredicted RBP17.11■□□□□ 0.33
LDB3-208ENST00000623007 TRPA1O75762 1119 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 KRT14P02533 472 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 MYCNP04198 464 aaPredicted RBP17.11■□□□□ 0.33
LDB3-208ENST00000623007 FAM200BP0CF97 657 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 GHRP10912 638 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 FGFR1P11362 822 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 STIP1P31948 543 aaKnown RBP17.11■□□□□ 0.33
LDB3-208ENST00000623007 AIF1P55008 147 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 UPP1Q16831 310 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 CEP85LQ5SZL2 805 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 KAZNQ674X7 775 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.11■□□□□ 0.33
LDB3-208ENST00000623007 CENPIQ92674 756 aaPredicted RBP17.11■□□□□ 0.33
LDB3-208ENST00000623007 WNT8BQ93098 351 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 ATP6V1G3Q96LB4 118 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 ZNF670Q9BS34 389 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 TMEM109Q9BVC6 243 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 ROPN1BQ9BZX4 212 aaPredicted RBP17.11■□□□□ 0.33
LDB3-208ENST00000623007 DPEP3Q9H4B8 488 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 ROPN1Q9HAT0 212 aaPredicted RBP17.11■□□□□ 0.33
LDB3-208ENST00000623007 LRRC4Q9HBW1 653 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 DDX43Q9NXZ2 648 aaKnown RBP17.11■□□□□ 0.33
LDB3-208ENST00000623007 STAP1Q9ULZ2 295 aa17.11■□□□□ 0.33
LDB3-208ENST00000623007 CFAP69A5D8W1 941 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 PI4K2BG5E9Z4 385 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 MCF2LO15068 1137 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 CYP11A1P05108 521 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 TGM2P21980 687 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 LMO2P25791 158 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 ADORA2BP29275 332 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 RGS7P49802 495 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 ADCY2Q08462 1091 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 KRT81Q14533 505 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 OASLQ15646 514 aaKnown RBP17.1■□□□□ 0.33
LDB3-208ENST00000623007 CCDC14Q49A88 953 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 ATP13A4Q4VNC1 1196 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 DAB2IPQ5VWQ8 1189 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 C4orf22Q6V702 233 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 ARFGAP1Q8N6T3 406 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 SLC35B2Q8TB61 432 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 ATG4AQ8WYN0 398 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 HAUS1Q96CS2 278 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 ADAM2Q99965 735 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 ACBD6Q9BR61 282 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 GOLGA2P5Q9HBQ8 144 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 TMBIM4Q9HC24 238 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 STARD7Q9NQZ5 370 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 RGS18Q9NS28 235 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.1■□□□□ 0.33
LDB3-208ENST00000623007 RCOR3Q9P2K3 495 aaPredicted RBP17.1■□□□□ 0.33
LDB3-208ENST00000623007 R3HDM2Q9Y2K5 976 aaKnown RBP17.1■□□□□ 0.33
LDB3-208ENST00000623007 KBTBD13C9JR72 458 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 H0YGN5 161 aa17.1■□□□□ 0.33
LDB3-208ENST00000623007 CST8O60676 142 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms