RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 AQP5P55064 265 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 WNT7BP56706 349 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 OTUD4Q01804 1114 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ORC1Q13415 861 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SNAPC2Q13487 334 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 IGDCC3Q8IVU1 814 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SCUBE1Q8IWY4 988 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 EMC1Q8N766 993 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 CEP120Q8N960 986 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 TTC25Q96NG3 672 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 AP5M1Q9H0R1 490 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 EBF3Q9H4W6 596 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 RHBDL2Q9NX52 303 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 STX18Q9P2W9 335 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 TMX2Q9Y320 296 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 DOT1LQ8TEK3 1739 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SCN7AQ01118 1682 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 MYO18AQ92614 2054 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ATP8B3O60423 1300 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 PRR5-ARHGAP8B1AHC4 643 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 WDR64B1ANS9 1081 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ALOX15BO15296 676 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 CFLARO15519 480 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 HLA-DRAP01903 254 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 CYP1A1P04798 512 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 CD48P09326 243 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SPATA31D3P0C874 917 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ANPEPP15144 967 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ELK3P41970 407 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ARHGAP8P85298 464 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 CDK16Q00536 496 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 LMNB2Q03252 620 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 DGKZQ13574 1117 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 DARS2Q6PI48 645 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 MTHFD1LQ6UB35 978 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SPATA31D4Q6ZUB0 917 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 PDIK1LQ8N165 341 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 RIBC1Q8N443 379 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 AGR3Q8TD06 166 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 GLIS2Q9BZE0 524 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 PDGFDQ9GZP0 370 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 KCNK13Q9HB14 408 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 NGRNQ9NPE2 291 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SAR1AQ9NR31 198 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 DDX18Q9NVP1 670 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 XPO7Q9UIA9 1087 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 PPP2R3BQ9Y5P8 575 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SLC4A7Q9Y6M7 1214 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 MYH9P35579 1960 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 COPEO14579 308 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 P4HA2O15460 535 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 RNASEH1O60930 286 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ATP6V1B1P15313 513 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 MSX2P35548 267 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 JAK3P52333 1124 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 HUNKP57058 714 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 KRT76Q01546 638 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 BTKQ06187 659 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 AP1B1Q10567 949 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ASPHQ12797 758 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 BAATQ14032 418 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 CHI3L2Q15782 390 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 CNPY1Q3B7I2 92 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 GRAMD1BQ3KR37 738 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 MROH9Q5TGP6 573 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 RAPH1Q70E73 1250 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 RSPH3Q86UC2 560 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ATP11CQ8NB49 1132 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 FEZF2Q8TBJ5 459 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 BSNDQ8WZ55 320 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 HSPH1Q92598 858 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ATG4CQ96DT6 458 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 SENP7Q9BQF6 1050 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 EBF4Q9BQW3 602 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 ASCC2Q9H1I8 757 aaPredicted RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 RANBP17Q9H2T7 1088 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 MRPL47Q9HD33 250 aaKnown RBP7.25□□□□□ -1.25
NEDD9-216ENST00000620854 INPP5FQ9Y2H2 1132 aa7.25□□□□□ -1.25
NEDD9-216ENST00000620854 TRIM49D1C9J1S8 452 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 MCF2LO15068 1137 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 DLDP09622 509 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 SRGAP2CP0DJJ0 459 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 OCRLQ01968 901 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 DSG1Q02413 1049 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 RALGPS1Q5JS13 557 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 TCHHL1Q5QJ38 904 aaPredicted RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 RNASEH2BQ5TBB1 312 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 OLFML2BQ68BL8 750 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 SPOCD1Q6ZMY3 1216 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 UNC45BQ8IWX7 931 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 THNSL1Q8IYQ7 743 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ALLCQ8N6M5 410 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 EXD1Q8NHP7 514 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 GATA6Q92908 595 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PTCD3Q96EY7 689 aaKnown RBP7.24□□□□□ -1.25
NEDD9-216ENST00000620854 GMCL1Q96IK5 515 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 PPP1R36Q96LQ0 422 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 ANKRD27Q96NW4 1050 aa7.24□□□□□ -1.25
NEDD9-216ENST00000620854 SLITRK1Q96PX8 696 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms