RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PPP1R14CQ8TAE6 165 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TBC1D10AQ9BXI6 508 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 OSBPL8Q9BZF1 889 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 DCLK3Q9C098 648 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TMEM117Q9H0C3 514 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 DNAAF2Q9NVR5 837 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ANGPTL2Q9UKU9 493 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 FOXO6A8MYZ6 492 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TJP3O95049 919 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CBX6O95503 412 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TAC1P20366 129 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ABCD1P33897 745 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ACOT2P49753 483 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ARFIP2P53365 341 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 LAMTOR4Q0VGL1 99 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CAPSQ13938 189 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 MORN1Q5T089 497 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TMC7Q7Z402 723 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 C12orf50Q8NA57 414 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 FBXL13Q8NEE6 735 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 PYROXD1Q8WU10 500 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 APBA2Q99767 749 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 MSTO1Q9BUK6 570 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 STRA6Q9BX79 667 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ADAM33Q9BZ11 813 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 IMPG2Q9BZV3 1241 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 NIF3L1Q9GZT8 377 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 FAM49AQ9H0Q0 323 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 PPCSQ9HAB8 311 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 DMAC2Q9NW81 257 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 PSMC3IPQ9P2W1 217 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CCDC189A1A4V9 331 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 NDUFB5O43674 189 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 AHCYL1O43865 530 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CSDE1O75534 798 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 BAG2O95816 211 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 MT-ND3P03897 115 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CYP1A2P05177 515 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 C6orf222P0C671 652 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CCNB1P14635 433 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TNNI1P19237 187 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 PTDSS1P48651 473 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ARSEP51690 589 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 CLDN10P78369 228 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 PDIA2Q13087 525 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 RCN1Q15293 331 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ZNF484Q5JVG2 852 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 MFSD14CQ5VZR4 134 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 LVRNQ6Q4G3 990 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 TLK2Q86UE8 772 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 SLC9A9Q8IVB4 645 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 RBBP8NLQ8NC74 664 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 FAM13CQ8NE31 585 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ZNF483Q8TF39 744 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 KAT5Q92993 513 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 RBM41Q96IZ5 413 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ZBTB45Q96K62 511 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 C11orf70Q9BRQ4 267 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ARHGAP39Q9C0H5 1083 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 FLRT1Q9NZU1 646 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 ARHGAP28Q9P2N2 729 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 AGO2Q9UKV8 859 aaKnown RBP7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 SCINQ9Y6U3 715 aa7.31□□□□□ -1.24
SRGAP3-213ENST00000618999 MCM3APO60318 1980 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 MAGEB2O15479 319 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 GAS2O43903 313 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ADCY3O60266 1144 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 STAU1O95793 577 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 OAS1P00973 400 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 CD58P19256 250 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 TM4SF4P48230 202 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 FLT3LGP49771 235 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 EFNA5P52803 228 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 YARSP54577 528 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 SNRPFP62306 86 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 DLG4P78352 724 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 BEX3Q00994 111 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 PPP3CAQ08209 521 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 THEMIS2Q5TEJ8 643 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ATCAYQ86WG3 371 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 CDR2LQ86X02 465 aaPredicted RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 GPD1LQ8N335 351 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 PLPP7Q8NBV4 271 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 PWWP2AQ96N64 755 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 SETD4Q9NVD3 440 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ABLIM1O14639 778 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ICMTO60725 284 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 PRKCBP05771 671 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 MMP3P08254 477 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ADSSP30520 456 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 OSTNP61366 133 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 GRIK3Q13003 919 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 CCNG2Q16589 344 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 SEZ6Q53EL9 994 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 UBAP2Q5T6F2 1119 aaKnown RBP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 SLFN12LQ6IEE8 588 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 ENOSF1Q7L5Y1 443 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 DTX3LQ8TDB6 740 aa7.3□□□□□ -1.24
SRGAP3-213ENST00000618999 PARD3BQ8TEW8 1205 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms