RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 SOAT2O75908 522 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 CALB1P05937 261 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 SETSIPP0DME0 302 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 OR1D2P34982 312 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 PPM1AP35813 382 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 GLUD2P49448 558 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 GPR15P49685 360 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 NDUFV1P49821 464 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 GTF2A1P52655 376 aaPredicted RBP17.13■□□□□ 0.33
SNAP47-213ENST00000617596 RPL7AP62424 266 aaKnown RBP17.13■□□□□ 0.33
SNAP47-213ENST00000617596 LIN9Q5TKA1 542 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 SDHAF4Q5VUM1 108 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 DCP1BQ8IZD4 617 aaKnown RBP17.13■□□□□ 0.33
SNAP47-213ENST00000617596 TPCN2Q8NHX9 752 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 ZNF564Q8TBZ8 553 aaPredicted RBP17.13■□□□□ 0.33
SNAP47-213ENST00000617596 PIK3R5Q8WYR1 880 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 SMARCD1Q96GM5 515 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 VCPIP1Q96JH7 1222 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 CRISPLD1Q9H336 500 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 SLC27A5Q9Y2P5 690 aa17.13■□□□□ 0.33
SNAP47-213ENST00000617596 A0A0A6YYK5 440 aaPredicted RBP17.12■□□□□ 0.33
SNAP47-213ENST00000617596 GRID2IPA4D2P6 1211 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 TMEM110-MUSTN1A8MSY1 372 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 F8VP50 259 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 H7C4K7 107 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 ENC1O14682 589 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 XPO1O14980 1071 aaKnown RBP17.12■□□□□ 0.33
SNAP47-213ENST00000617596 VNN2O95498 520 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 MYBL1P10243 752 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 BMPR1AP36894 532 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 DSG1Q02413 1049 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 KRT17Q04695 432 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 TAF5Q15542 800 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 MAPRE1Q15691 268 aaKnown RBP17.12■□□□□ 0.33
SNAP47-213ENST00000617596 OR6B2Q6IFH4 312 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 PLEKHA7Q6IQ23 1121 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 FAM183BPQ6ZVS7 135 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 CPNE8Q86YQ8 564 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 SUGP1Q8IWZ8 645 aaKnown RBP17.12■□□□□ 0.33
SNAP47-213ENST00000617596 C10orf67Q8IYJ2 551 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 PPM1EQ8WY54 764 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 TRIM11Q96F44 468 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 CLSTN3Q9BQT9 956 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 HERC2P3Q9BVR0 1158 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 SLC4A5Q9BY07 1137 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 MTRRQ9UBK8 725 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 YBX2Q9Y2T7 364 aaKnown RBP17.12■□□□□ 0.33
SNAP47-213ENST00000617596 ATP8B3O60423 1300 aa17.12■□□□□ 0.33
SNAP47-213ENST00000617596 TCRBV5S1A1TA0A578 114 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 WDR27A2RRH5 827 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 PAPSS1O43252 624 aaPredicted RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 BUB1BO60566 1050 aaPredicted RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 GRAP2O75791 330 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 SEC31AO94979 1220 aaKnown RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 FTCDO95954 541 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 URODP06132 367 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 GRIK1P39086 918 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 GABRB2P47870 512 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 SLC8A3P57103 927 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 ROR1Q01973 937 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 ADIGQ0VDE8 80 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 DNAJC24Q6P3W2 148 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 C4orf50Q6ZRC1 276 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 TMEM110Q86TL2 294 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 SCN4BQ8IWT1 228 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 RHOT2Q8IXI1 618 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 RNF10Q8N5U6 811 aaKnown RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 MCEEQ96PE7 176 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 NCAPGQ9BPX3 1015 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 CERS4Q9HA82 394 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 AVENQ9NQS1 362 aaPredicted RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 RAB21Q9UL25 225 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 PCDHGC5Q9Y5F6 944 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 RNASE9P60153 205 aaKnown RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 GPR17Q13304 367 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 DDR2Q16832 855 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 LONRF2Q1L5Z9 754 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 TTC31Q49AM3 519 aaPredicted RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 DAB2IPQ5VWQ8 1189 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 EMC1Q8N766 993 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 JOSD2Q8TAC2 188 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 GPR152Q8TDT2 470 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 FAM107BQ9H098 131 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 METTL5Q9NRN9 209 aaKnown RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 PARVAQ9NVD7 372 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 ANAPC7Q9UJX3 599 aa17.11■□□□□ 0.33
SNAP47-213ENST00000617596 PACSIN2Q9UNF0 486 aaPredicted RBP17.11■□□□□ 0.33
SNAP47-213ENST00000617596 MTMR11A4FU01 709 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 HHLA1C9JL84 531 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 NCK2O43639 380 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 DNAJB1P25685 340 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 DNA2P51530 1060 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 ERVFC1P60507 584 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 IFRD2Q12894 506 aaPredicted RBP17.1■□□□□ 0.33
SNAP47-213ENST00000617596 MESDQ14696 234 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 NFE2Q16621 373 aaPredicted RBP17.1■□□□□ 0.33
SNAP47-213ENST00000617596 FAM102AQ5T9C2 384 aaPredicted RBP17.1■□□□□ 0.33
SNAP47-213ENST00000617596 SLC8B1Q6J4K2 584 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 PPP1R2P3Q6NXS1 205 aa17.1■□□□□ 0.33
SNAP47-213ENST00000617596 HDXQ7Z353 690 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms