RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PDK2Q15119 407 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 PCSK7Q16549 785 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 FUT11Q495W5 492 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 UBA3Q8TBC4 463 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 MAGED4Q96JG8 741 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 NRDE2Q9H7Z3 1164 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 FAM49BQ9NUQ9 324 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 THAP1Q9NVV9 213 aa11.02□□□□□ -0.64
CLTCL1-209ENST00000617103 DNALI1O14645 258 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 ECE2O60344 883 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 ANXA9O76027 345 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 PYGMP11217 842 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 POU4F1Q01851 419 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 XRCC4Q13426 336 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 C2CD6Q53TS8 623 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 MOXD1Q6UVY6 613 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 B3GNT6Q6ZMB0 384 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 SLC20A1Q8WUM9 679 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 CNPY3Q9BT09 278 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 ZNF518BQ9C0D4 1074 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 ATAD3AQ9NVI7 634 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.02□□□□□ -0.651e-15■■■■■ 72.7
CLTCL1-209ENST00000617103 PCDHGC5Q9Y5F6 944 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 CDC42BPBQ9Y5S2 1711 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 FAM95CA0A1B0GW59 222 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 SMNDC1O75940 238 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 SERPINE1P05121 402 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 SF3B3Q15393 1217 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 DCAF6Q58WW2 860 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 KCNT1Q5JUK3 1230 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 TBCELQ5QJ74 424 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 KCNV1Q6PIU1 500 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 UNC45BQ8IWX7 931 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 DIS3LQ8TF46 1054 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 SH3KBP1Q96B97 665 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 APOPT1Q96IL0 206 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 H2AFY2Q9P0M6 372 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 CORO1CQ9ULV4 474 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 RUVBL2Q9Y230 463 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 MADDQ8WXG6 1647 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 MSH4O15457 936 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 TOMM70O94826 608 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 NR3C2P08235 984 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 MUTP22033 750 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 NFYCQ13952 458 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 DCAF4L1Q3SXM0 396 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 CBWD2Q8IUF1 395 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 TDRD5Q8NAT2 981 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 WDR60Q8WVS4 1066 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 HES6Q96HZ4 224 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 WRNIP1Q96S55 665 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 DUSP9Q99956 384 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 TARS2Q9BW92 718 aaKnown RBP11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 TUBGCP4Q9UGJ1 667 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 STARD13Q9Y3M8 1113 aa11.02□□□□□ -0.65
CLTCL1-209ENST00000617103 A0A087WXM4 84 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 SPDYE5A6NIY4 337 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 TRIM24O15164 1050 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 CLOCKO15516 846 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 PDGFRBP09619 1106 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 RARAP10276 462 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 PRKCEQ02156 737 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 DDR1Q08345 913 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 TP53BP2Q13625 1128 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 BMPR2Q13873 1038 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 MYBPC2Q14324 1141 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 PKN2Q16513 984 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 SPDYE7PQ495Y7 208 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 KCTD21Q4G0X4 260 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 TCHHL1Q5QJ38 904 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 HDDC2Q7Z4H3 204 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 KIAA0895Q8NCT3 520 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 OR6Y1Q8NGX8 325 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 ZNF333Q96JL9 665 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 KCTD10Q9H3F6 313 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 CROCC2H7BZ55 1655 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 BAATQ14032 418 aaPredicted RBP11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 CNGA2Q16280 664 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 AGKQ53H12 422 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 DENND5BQ6ZUT9 1274 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 DCUN1D1Q96GG9 259 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 CATSPERBQ9H7T0 1116 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 CYLDQ9NQC7 956 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 ARMCX1Q9P291 453 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 CTNNAL1Q9UBT7 734 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 ACOT9Q9Y305 439 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 MAFGO15525 162 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 PRPF4O43172 522 aaKnown RBP eCLIP11.01□□□□□ -0.651e-9■■■■■ 32.7
CLTCL1-209ENST00000617103 ALADP13716 330 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 ME2P23368 584 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 NNMTP40261 264 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 PTDSS1P48651 473 aaKnown RBP11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 PKN3Q6P5Z2 889 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 DNAAF5Q86Y56 855 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 SEPT1Q8WYJ6 367 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 RSPH1Q8WYR4 309 aa11.01□□□□□ -0.65
CLTCL1-209ENST00000617103 USP13Q92995 863 aaPredicted RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms